CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.34.32.1
(
Phytophthora capsici
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.34.32.1
T146131_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.34.32.1
C2H2 ZF
22
46
HKCPHRGCGRQFNRKYTLVEHMKTH
e_gw1.34.32.1
C2H2 ZF
52
76
HVCPVRSCSKRFSTSGNLSRHKRLH
e_gw1.34.32.1
C2H2 ZF
82
106
LECPVDGCYCTFPSDNKLDKHMQFH
e_gw1.34.32.1
C2H2 ZF
112
137
HVCTIGNCGKTFSTTGNLNRHVKQHH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora capsici
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.659
Phytophthora lateralis
fgenesh_scip_prom.28083.659
N
0.822
fgenesh_scip_prom.46568.9634
Phytophthora kernoviae
fgenesh_scip_prom.46568.9634
N
0.822
Phyra76424
Phytophthora ramorum
Phyra76424
N
0.822
F443_10169
Phytophthora parasitica
F443_10169
N
0.819
Physo128916
Phytophthora sojae
Physo128916
N
0.812
snap_masked-pve_contig_11-abinit-gene-0.108
Pythium vexans
snap_masked-pve_contig_11-abinit-gene-0.108
N
0.797
PYU1_G008757
Pythium ultimum
PYU1_G008757
N
0.767
maker-pir_contig_2201-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_2201-fgenesh-gene-0.0
N
0.764
maker-pir_contig_723-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_723-fgenesh-gene-0.2
N
0.764
PYU1_G008755
Pythium ultimum
PYU1_G008755
N
0.764
fgenesh_scip_prom.28083.660
Phytophthora lateralis
fgenesh_scip_prom.28083.660
N
0.762
fgenesh_scip_prom.46568.9633
Phytophthora kernoviae
fgenesh_scip_prom.46568.9633
N
0.762
Phyra76423
Phytophthora ramorum
Phyra76423
N
0.762