CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr4.CM0119.380.nc
(
Lotus japonicus
)
CSD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00313 (CSD)
IPR002059
chr4.CM0119.380.nc
T165602_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr4.CM0119.380.nc
CSD
6
72
FSGVVQWFNNVKGFGFIKPDDGGEDLFVHQSSIRSDGYRTLLEGDLVEFSIATGDNDKTKAVDVTGP
Links
Other
CSD
family TFs
Other
Lotus japonicus
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G05335
Glycine max
GLYMA02G05335
N
0.924
GLYMA16G23695
Glycine max
GLYMA16G23695
N
0.924
MDP0000121628
Malus domestica
MDP0000121628
N
0.742
cassava12557.valid.m1
Manihot esculenta
cassava12557.valid.m1
N
0.712
gene14603-v1.0-hybrid
Fragaria vesca
gene14603-v1.0-hybrid
N
0.712
MDP0000198079
Malus domestica
MDP0000198079
N
0.712
MDP0000632148
Malus domestica
MDP0000632148
N
0.712