Cla006390 (Citrullus lanatus)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Cla006390 T175285_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.761 0.761
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.761 0.761
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006390 EIN3 40 174

Links

Other EIN3 family TFs
Other Citrullus lanatus TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.910
PK19114.1 Cannabis sativa PK19114.1 I 0.866
30169.m006395 Ricinus communis 30169.m006395 I 0.858
TCM_040510 Theobroma cacao TCM_040510 I 0.843
MDP0000490180 Malus domestica MDP0000490180 I 0.836
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.828
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.828
MDP0000562585 Malus domestica MDP0000562585 I 0.828
MDP0000565880 Malus domestica MDP0000565880 I 0.828
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.828
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.828
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.821
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.813
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.813
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.799
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.799
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.791
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.776
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.776
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.769
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
OBART09G14750 Oryza barthii OBART09G14750 I 0.754
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.754
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.754
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.754
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.754
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.754
OS09G0490200 Oryza sativa OS09G0490200 D 0.754
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.754
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.746
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.746
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.739
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.731
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.724
F775_17920 Aegilops tauschii F775_17920 I 0.716
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.716
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.716
Si029259m.g Setaria italica Si029259m.g I 0.709