Pavir.J14329 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.J14329 T175401_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.884 0.884
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.747 0.747
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J14329.1.p EIN3 38 286
Pavir.J14329.2.p EIN3 38 286

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.964
Si029259m.g Setaria italica Si029259m.g I 0.952
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.936
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.924
Traes_5DL_62DEF8361 Triticum aestivum Traes_5DL_62DEF8361 I 0.923
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.916
OB09G21280 Oryza brachyantha OB09G21280 I 0.908
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.904
F775_17920 Aegilops tauschii F775_17920 I 0.900
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.900
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.896
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.892
OBART09G14750 Oryza barthii OBART09G14750 I 0.888
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.888
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.888
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.888
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.880
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.880
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.880
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.880
OS09G0490200 Oryza sativa OS09G0490200 D 0.880
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.835
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.831
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.831
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.831
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.827
Si013426m.g Setaria italica Si013426m.g I 0.827
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.827
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.827
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.827
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.823
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.819
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.819
OB08G26880 Oryza brachyantha OB08G26880 I 0.819
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.819
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.819
OBART08G19960 Oryza barthii OBART08G19960 I 0.815
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.815
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.813
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.811
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.811
OS08G0508700 Oryza sativa OS08G0508700 I 0.811
Pavir.Fa00424 Panicum virgatum Pavir.Fa00424 I 0.811
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.807
TRIUR3_08597 Triticum urartu TRIUR3_08597 I 0.806
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.793
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.785
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.781
30169.m006395 Ricinus communis 30169.m006395 I 0.777
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.777
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.773
Bo6g118030 Brassica oleracea Bo6g118030 I 0.772
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.769
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.769
MDP0000490180 Malus domestica MDP0000490180 I 0.769
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.769
Pm028171 Prunus mume Pm028171 I 0.767
Bo6g087550 Brassica oleracea Bo6g087550 I 0.766
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.765
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.765
PK19114.1 Cannabis sativa PK19114.1 I 0.765
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.764
Thhalv10018327m.g Eutrema salsugineum Thhalv10018327m.g I 0.764
BGIOSGA026709 Oryza indica BGIOSGA026709 I 0.763
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.763
Bra015970 Brassica rapa Bra015970 I 0.762
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.761
EIL3 Arabidopsis lyrata scaffold_202309.1 I 0.760
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.760
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.760
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.759
MDP0000562585 Malus domestica MDP0000562585 I 0.759
MDP0000565880 Malus domestica MDP0000565880 I 0.759
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.758
PGSC0003DMG400021381 Solanum tuberosum PGSC0003DMG400021381 I 0.757
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.757
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.757
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.757
EIL3 Arabidopsis thaliana AT1G73730 D 0.756
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.755
TCM_040510 Theobroma cacao TCM_040510 I 0.755
Bra008110 Brassica rapa Bra008110 I 0.753
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.753
Solyc01g006650.1 Solanum lycopersicum Solyc01g006650.1 I 0.753
Ca_02669 Cicer arietinum Ca_02669 I 0.753
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.751
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.749
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.747
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.745
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.745
mgf020935m Mimulus guttatus mgf020935m I 0.745
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.745
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.739
SELMODRAFT_419770 Selaginella moellendorffii SELMODRAFT_419770 I 0.730
cassava30700.valid.m1 Manihot esculenta cassava30700.valid.m1 I 0.720
POPTR_0001s05370 Populus trichocarpa POPTR_0001s05370 I 0.716
Cla006390 Citrullus lanatus Cla006390 I 0.716
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.714
Gorai.013G250300 Gossypium raimondii Gorai.013G250300 I 0.709
OLONG_020705 Oryza longistaminata OLONG_020705 I 0.700