Pavir.Fa00424 (Panicum virgatum)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Pavir.Fa00424 T175393_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS09G0490200
M01970_2.00 		Oryza sativa
NMGRTACATNN
NNATGTAYCKN		 PBM
Weirauch et al.(2014)
pTH9013 		0.807 0.807
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00424.1.p EIN3 38 286
Pavir.Fa00424.2.p EIN3 38 286

Links

Other EIN3 family TFs
Other Panicum virgatum TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Fb01951 Panicum virgatum Pavir.Fb01951 I 0.964
Si013426m.g Setaria italica Si013426m.g I 0.900
Sb07g027790 Sorghum bicolor Sb07g027790 I 0.875
AC234203.1_FG011 Zea mays AC234203.1_FG011 I 0.863
LPERR08G16890 Leersia perrieri LPERR08G16890 I 0.863
Traes_7AS_34D476D5D1 Triticum aestivum Traes_7AS_34D476D5D1 I 0.855
Traes_7BS_733347AC0 Triticum aestivum Traes_7BS_733347AC0 I 0.855
Traes_7DS_3673F1C73 Triticum aestivum Traes_7DS_3673F1C73 I 0.855
TRIUR3_28079 Triticum urartu TRIUR3_28079 I 0.855
OB08G26880 Oryza brachyantha OB08G26880 I 0.843
OBART08G19960 Oryza barthii OBART08G19960 I 0.843
BRADI3G39970 Brachypodium distachyon BRADI3G39970 I 0.839
MLOC_10315 Hordeum vulgare MLOC_10315 I 0.839
OMERI08G16770 Oryza meridionalis OMERI08G16770 I 0.839
OGLUM08G21190 Oryza glumaepatula OGLUM08G21190 I 0.835
ONIVA08G22530 Oryza nivara ONIVA08G22530 I 0.835
OPUNC08G18080 Oryza punctata OPUNC08G18080 I 0.835
ORUFI08G22370 Oryza rufipogon ORUFI08G22370 I 0.831
OS08G0508700 Oryza sativa OS08G0508700 I 0.831
Si029259m.g Setaria italica Si029259m.g I 0.827
BRADI4G33750 Brachypodium distachyon BRADI4G33750 I 0.823
Sb02g028390 Sorghum bicolor Sb02g028390 I 0.819
OB09G21280 Oryza brachyantha OB09G21280 I 0.815
LPERR09G10870 Leersia perrieri LPERR09G10870 I 0.811
OBART09G14750 Oryza barthii OBART09G14750 I 0.811
OGLUM09G15380 Oryza glumaepatula OGLUM09G15380 I 0.811
ONIVA08G17420 Oryza nivara ONIVA08G17420 I 0.811
ORGLA09G0113600 Oryza glaberrima ORGLA09G0113600 I 0.811
Pavir.J14329 Panicum virgatum Pavir.J14329 I 0.811
BGIOSGA029545 Oryza indica BGIOSGA029545 I 0.807
MLOC_10823 Hordeum vulgare MLOC_10823 I 0.807
OMERI09G11470 Oryza meridionalis OMERI09G11470 I 0.807
OPUNC09G13210 Oryza punctata OPUNC09G13210 I 0.807
ORUFI09G15900 Oryza rufipogon ORUFI09G15900 I 0.807
OS09G0490200 Oryza sativa OS09G0490200 D 0.807
Traes_5BL_B6051DD37 Triticum aestivum Traes_5BL_B6051DD37 I 0.807
Pavir.J02229 Panicum virgatum Pavir.J02229 I 0.807
F775_17920 Aegilops tauschii F775_17920 I 0.803
GRMZM2G006752 Zea mays GRMZM2G006752 I 0.803
Traes_5AL_B65EF5518 Triticum aestivum Traes_5AL_B65EF5518 I 0.799
GSMUA_Achr9G27680_001 Musa acuminata GSMUA_Achr9G27680_001 I 0.767
PDK_20s1301801g002 Phoenix dactylifera PDK_20s1301801g002 I 0.763
GSMUA_Achr8G25580_001 Musa acuminata GSMUA_Achr8G25580_001 I 0.759
GSMUA_Achr3G11160_001 Musa acuminata GSMUA_Achr3G11160_001 I 0.735
BGIOSGA026709 Oryza indica BGIOSGA026709 I 0.731
Pm028171 Prunus mume Pm028171 I 0.731
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.731
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.731
mgf020935m Mimulus guttatus mgf020935m I 0.729
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.727
30169.m006395 Ricinus communis 30169.m006395 I 0.727
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.723
TCM_040510 Theobroma cacao TCM_040510 I 0.723
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.723
Aquca_007_00017 Aquilegia coerulea Aquca_007_00017 I 0.723
Lus10031245.g Linum usitatissimum Lus10031245.g I 0.723
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.723
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.721
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.721
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.721
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.721
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.719
MDP0000490180 Malus domestica MDP0000490180 I 0.719
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.719
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.719
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.715
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.715
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.715
MDP0000562585 Malus domestica MDP0000562585 I 0.715
MDP0000565880 Malus domestica MDP0000565880 I 0.715
PK19114.1 Cannabis sativa PK19114.1 I 0.715
TRIUR3_08597 Triticum urartu TRIUR3_08597 I 0.712
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.711
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.711
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.711
Gorai.010G128700 Gossypium raimondii Gorai.010G128700 I 0.707
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.703
Ca_02669 Cicer arietinum Ca_02669 I 0.703