mgf026090m (Mimulus guttatus)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 mgf026090m T246630_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.863 0.863
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.863 0.863
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.863 0.863
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.753 0.753
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf026090m LOB 1 73

Links

Other LOB family TFs
Other Mimulus guttatus TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.904
Bra016877 Brassica rapa Bra016877 I 0.890
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.890
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.890
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.890
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.877
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I 0.877
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.877
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.877
LBD16 Arabidopsis thaliana AT2G42430 D 0.863
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.863
Solyc09g066260.2 Solanum lycopersicum Solyc09g066260.2 I 0.863
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.863
GSMUA_Achr3G27340_001 Musa acuminata GSMUA_Achr3G27340_001 I 0.849
Lus10033872.g Linum usitatissimum Lus10033872.g I 0.836
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.808
OBART02G37570 Oryza barthii OBART02G37570 I 0.808
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.808
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.808
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.808
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.808
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.808
OS02G0820500 Oryza sativa OS02G0820500 I 0.808
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.795
Si019578m.g Setaria italica Si019578m.g I 0.795
Lus10014757.g Linum usitatissimum Lus10014757.g I 0.795
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I 0.795
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I 0.781
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I 0.781
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I 0.781
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.767
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.767
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.767
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.767
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I 0.753
Thhalv10006423m.g Eutrema salsugineum Thhalv10006423m.g I 0.753
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.740
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.740
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.740
GSMUA_Achr5G13230_001 Musa acuminata GSMUA_Achr5G13230_001 I 0.740
mgf020773m Mimulus guttatus mgf020773m I 0.740
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.740
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I 0.740
LBD20 Arabidopsis thaliana AT3G03760 I 0.726
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.726
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.726
LBD20 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000301 I 0.726
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I 0.726
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.726
OB08G30680 Oryza brachyantha OB08G30680 I 0.726
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.726
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.726
Pm020628 Prunus mume Pm020628 I 0.726
cassava25975.m1 Manihot esculenta cassava25975.m1 I 0.726
Bostr.19046s0098 Boechera stricta Bostr.19046s0098 I 0.726
Cagra.2098s0013 Capsella grandiflora Cagra.2098s0013 I 0.726
Carubv10015417m.g Capsella rubella Carubv10015417m.g I 0.726
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.726
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.726
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I 0.726
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I 0.726
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I 0.712
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.712
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.712
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.712
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I 0.712
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.712
MLOC_55239 Hordeum vulgare MLOC_55239 I 0.712
OBART03G10450 Oryza barthii OBART03G10450 I 0.712
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.712
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.712
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.712
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.712
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.712
OS03G0246900 Oryza sativa OS03G0246900 I 0.712
PRUPE_ppa024802mg Prunus persica PRUPE_ppa024802mg I 0.712
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I 0.712
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I 0.712
Pm028642 Prunus mume Pm028642 I 0.712
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I 0.712
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I 0.712
PK23185.1 Cannabis sativa PK23185.1 I 0.712
chr1.LjT38H23.30.nd Lotus japonicus chr1.LjT38H23.30.nd I 0.712