CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G26320
(
Brachypodium distachyon
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BRADI2G26320
T253403_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G26320.1
MADS box
18
65
RIENQQARQVTFSKRRFGLFKKASSLSVLCGVELAAVIFSPGGKAFSF
Links
Other
MADS box
family TFs
Other
Brachypodium distachyon
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.750
BRADI4G39420
Brachypodium distachyon
BRADI4G39420
N
0.750
F775_04223
Aegilops tauschii
F775_04223
I
0.750
F775_43210
Aegilops tauschii
F775_43210
I
0.750
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.750
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.750
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.750
Si019951m.g
Setaria italica
Si019951m.g
I
0.750
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.750
Traes_6DL_609A01BD5
Triticum aestivum
Traes_6DL_609A01BD5
I
0.750
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.750
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.750
GSMUA_Achr8G07230_001
Musa acuminata
GSMUA_Achr8G07230_001
I
0.729
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.729
chr5.LjT39E05.40.nd
Lotus japonicus
chr5.LjT39E05.40.nd
N
0.729
OPUNC09G00580
Oryza punctata
OPUNC09G00580
N
0.708
BGIOSGA015023
Oryza indica
BGIOSGA015023
I
0.700