CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g105290
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_2g105290
T254738_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH39659
MADS box
20
67
KVEKDSNKLVTFSKRRQGLFRKASELCVLCDVHAAIIVFSPGDKLYCF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g127140
Medicago truncatula
MTR_4g127140
N
0.917
MTR_8g086290
Medicago truncatula
MTR_8g086290
N
0.833
Ca_04658
Cicer arietinum
Ca_04658
N
0.771
GLYMA17G01771
Glycine max
GLYMA17G01771
N
0.750
GLYMA20G27361
Glycine max
GLYMA20G27361
N
0.750
MTR_4g036915
Medicago truncatula
MTR_4g036915
I
0.750
MTR_7g028448
Medicago truncatula
MTR_7g028448
I
0.750
Ca_18845
Cicer arietinum
Ca_18845
N
0.750
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.708
Cucsa.342610
Cucumis sativus
Cucsa.342610
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.708
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
chr5.LjT25B19.200.nd
Lotus japonicus
chr5.LjT25B19.200.nd
N
0.708