CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_025674
(
Theobroma cacao
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
TCM_025674
T256465_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOY10302
MADS box
10
56
YITKDSARKSTFKKGKKGLLKKASELSTLCGIEGFMIIYNPYDAQLE
Links
Other
MADS box
family TFs
Other
Theobroma cacao
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.contig_27586
Carica papaya
evm.TU.contig_27586
I
0.727
TCM_025671
Theobroma cacao
TCM_025671
I
0.723
cassava15247.m1
Manihot esculenta
cassava15247.m1
I
0.711
TCM_025670
Theobroma cacao
TCM_025670
I
0.708
evm.TU.supercontig_1256.1
Carica papaya
evm.TU.supercontig_1256.1
N
0.702
Gorai.004G292000
Gossypium raimondii
Gorai.004G292000
I
0.702