CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT5G01200
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT5G01200
T266510_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G01200.1
Myb
145
192
GVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_6000079
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_6000079
N
0.881
Cagra.7888s0001
Capsella grandiflora
Cagra.7888s0001
N
0.822
Carubv10001741m.g
Capsella rubella
Carubv10001741m.g
N
0.822
Bostr.6251s0088
Boechera stricta
Bostr.6251s0088
I
0.814
Thhalv10014410m.g
Eutrema salsugineum
Thhalv10014410m.g
I
0.812
Bo2g002350
Brassica oleracea
Bo2g002350
I
0.775
Bra028892
Brassica rapa
Bra028892
I
0.751
Thhalv10014270m.g
Eutrema salsugineum
Thhalv10014270m.g
I
0.683
Bra002610
Brassica rapa
Bra002610
I
0.672
Lus10028264.g
Linum usitatissimum
Lus10028264.g
I
0.667
GLYMA18G42530
Glycine max
GLYMA18G42530
I
0.664
Bo9g135730
Brassica oleracea
Bo9g135730
I
0.662