fgenesh1_pg.C_scaffold_6000079 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh1_pg.C_scaffold_6000079 T270679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_6000079 Myb 27 77
fgenesh1_pg.C_scaffold_6000079 Myb 145 192

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G01200 Arabidopsis thaliana AT5G01200 N 0.881
Cagra.7888s0001 Capsella grandiflora Cagra.7888s0001 N 0.826
Carubv10001741m.g Capsella rubella Carubv10001741m.g N 0.826
Bostr.6251s0088 Boechera stricta Bostr.6251s0088 I 0.801
Thhalv10014410m.g Eutrema salsugineum Thhalv10014410m.g I 0.792
Bo2g002350 Brassica oleracea Bo2g002350 I 0.772
Bra028892 Brassica rapa Bra028892 I 0.748
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.670
Lus10028264.g Linum usitatissimum Lus10028264.g I 0.667