cassava14740.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava14740.m1 T284014_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.845 0.935
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.810 0.892
MYB57
M01072_2.00 		Arabidopsis thaliana
RCCTAAYT
ARTTAGGY		 PBM
Sullivan et al.(2014)
pTH9748 		0.787 0.839
MYB57
M07059_2.00 		Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR		 Dap-seq
OMalley et al.(2016)
MYB57_col_a 		0.787 0.839
MYB57
M07060_2.00 		Arabidopsis thaliana
ACCTAAY
RTTAGGT		 Dap-seq
OMalley et al.(2016)
MYB57_colamp_a 		0.787 0.839
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.691 0.753
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.691 0.753
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.675 0.742
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.675 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14740.m1 Myb 15 62
cassava14740.m1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.859
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.859
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.859
TCM_016901 Theobroma cacao TCM_016901 I 0.859
Pm015692 Prunus mume Pm015692 I 0.859
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.859
Solyc02g067760.2 Solanum lycopersicum Solyc02g067760.2 I 0.858
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.857
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.857
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.857
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.855
PGSC0003DMG400000485 Solanum tuberosum PGSC0003DMG400000485 I 0.852
GLYMA05G08690 Glycine max GLYMA05G08690 I 0.850
GLYMA19G00930 Glycine max GLYMA19G00930 I 0.850
evm.TU.supercontig_186.7 Carica papaya evm.TU.supercontig_186.7 I 0.850
gene28435-v1.0-hybrid Fragaria vesca gene28435-v1.0-hybrid I 0.850
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.850
MDP0000344978 Malus domestica MDP0000344978 I 0.850
Cucsa.339770 Cucumis sativus Cucsa.339770 I 0.849
MTR_7g035075 Medicago truncatula MTR_7g035075 I 0.847
MYB05_ANTMA Antirrhinum majus MYB05_ANTMA D 0.845
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.843
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.839
SapurV1A.0358s0050 Salix purpurea SapurV1A.0358s0050 I 0.838
mgf000555m Mimulus guttatus mgf000555m I 0.834
Cla017370 Citrullus lanatus Cla017370 I 0.832
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I 0.829
Cucsa.011440 Cucumis sativus Cucsa.011440 I 0.828
Lus10014557.g Linum usitatissimum Lus10014557.g I 0.824
Lus10032129.g Linum usitatissimum Lus10032129.g I 0.824
Cla010584 Citrullus lanatus Cla010584 I 0.819
Aquca_002_00135 Aquilegia coerulea Aquca_002_00135 I 0.815
MYB24 Arabidopsis thaliana AT5G40350 D 0.810
VIT_14s0066g01090 Vitis vinifera VIT_14s0066g01090 I 0.805
GSMUA_Achr1G27270_001 Musa acuminata GSMUA_Achr1G27270_001 I 0.795
Bostr.7200s0008 Boechera stricta Bostr.7200s0008 I 0.793
Carubv10007254m.g Capsella rubella Carubv10007254m.g I 0.793
Thhalv10027930m.g Eutrema salsugineum Thhalv10027930m.g I 0.793
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.792
ATMYB57 Arabidopsis lyrata Al_scaffold_0003_59 I 0.787
MYB57 Arabidopsis thaliana AT3G01530 D 0.787
Bostr.1460s0057 Boechera stricta Bostr.1460s0057 I 0.787
Cagra.1561s0019 Capsella grandiflora Cagra.1561s0019 I 0.787
Carubv10016245m.g Capsella rubella Carubv10016245m.g I 0.787
Eucgr.I01782 Eucalyptus grandis Eucgr.I01782 I 0.786
MYB21 Arabidopsis thaliana AT3G27810 I 0.779
Bo7g085930 Brassica oleracea Bo7g085930 I 0.779
Bo9g008370 Brassica oleracea Bo9g008370 I 0.779
Bra025300 Brassica rapa Bra025300 I 0.779
Bra039067 Brassica rapa Bra039067 I 0.779
ATMYB21 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000445 I 0.779
Bostr.0556s0458 Boechera stricta Bostr.0556s0458 I 0.779
Cagra.11216s0001 Capsella grandiflora Cagra.11216s0001 I 0.779
Carubv10018700m.g Capsella rubella Carubv10018700m.g I 0.779
Thhalv10004857m.g Eutrema salsugineum Thhalv10004857m.g I 0.779
GSMUA_Achr6G27290_001 Musa acuminata GSMUA_Achr6G27290_001 I 0.776
Bra001005 Brassica rapa Bra001005 I 0.775
Bo3g055110 Brassica oleracea Bo3g055110 I 0.767
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.762
Bo5g155050 Brassica oleracea Bo5g155050 I 0.759
Bra039108 Brassica rapa Bra039108 I 0.746
gene03712-v1.0-hybrid Fragaria vesca gene03712-v1.0-hybrid I 0.744
MDP0000934638 Malus domestica MDP0000934638 I 0.744
PK28164.1 Cannabis sativa PK28164.1 I 0.741
chr4.CM0042.760.nc Lotus japonicus chr4.CM0042.760.nc I 0.727
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.721
Solyc03g119370.1 Solanum lycopersicum Solyc03g119370.1 I 0.721
GLYMA10G41930 Glycine max GLYMA10G41930 I 0.713
GLYMA08G04670 Glycine max GLYMA08G04670 I 0.711
GLYMA09G31570 Glycine max GLYMA09G31570 I 0.707
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I 0.704
GLYMA20G25110 Glycine max GLYMA20G25110 I 0.703
MTR_1g110460 Medicago truncatula MTR_1g110460 I 0.703
PGSC0003DMG400014550 Solanum tuberosum PGSC0003DMG400014550 I 0.703
Solyc05g009230.1 Solanum lycopersicum Solyc05g009230.1 I 0.703
VIT_01s0011g03730 Vitis vinifera VIT_01s0011g03730 I 0.703
Ca_05503 Cicer arietinum Ca_05503 I 0.703
PK13281.1 Cannabis sativa PK13281.1 I 0.703
LjT44F11.120.nd Lotus japonicus LjT44F11.120.nd I 0.703
GSMUA_Achr3G01370_001 Musa acuminata GSMUA_Achr3G01370_001 I 0.702
POPTR_0008s12130 Populus trichocarpa POPTR_0008s12130 I 0.700
TCM_009642 Theobroma cacao TCM_009642 I 0.700
evm.TU.supercontig_49.71 Carica papaya evm.TU.supercontig_49.71 I 0.700
evm.TU.supercontig_798.1 Carica papaya evm.TU.supercontig_798.1 I 0.700
Gorai.002G218600 Gossypium raimondii Gorai.002G218600 I 0.700
Lus10041435.g Linum usitatissimum Lus10041435.g I 0.700
BGIOSGA002469 Oryza indica BGIOSGA002469 I 0.699
GRMZM2G096358 Zea mays GRMZM2G096358 I 0.699
GRMZM2G162709 Zea mays GRMZM2G162709 I 0.699
LPERR01G01750 Leersia perrieri LPERR01G01750 I 0.699
OB01G11750 Oryza brachyantha OB01G11750 I 0.699
OBART01G01830 Oryza barthii OBART01G01830 I 0.699
OGLUM01G02010 Oryza glumaepatula OGLUM01G02010 I 0.699
OLONG_008024 Oryza longistaminata OLONG_008024 I 0.699
OMERI01G01310 Oryza meridionalis OMERI01G01310 I 0.699
ONIVA01G01990 Oryza nivara ONIVA01G01990 I 0.699
ORGLA01G0016500 Oryza glaberrima ORGLA01G0016500 I 0.699
Sb03g007360 Sorghum bicolor Sb03g007360 I 0.699
Pavir.Ea00660 Panicum virgatum Pavir.Ea00660 I 0.699
Pavir.Eb00654 Panicum virgatum Pavir.Eb00654 I 0.699
AMTR_s00079p00140660 Amborella trichopoda AMTR_s00079p00140660 I 0.698
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.698
GSMUA_Achr2G22640_001 Musa acuminata GSMUA_Achr2G22640_001 I 0.697
cassava12704.valid.m1 Manihot esculenta cassava12704.valid.m1 I 0.697
Bo7g050560 Brassica oleracea Bo7g050560 I 0.696
Bra012482 Brassica rapa Bra012482 I 0.696
POPTR_0010s13290 Populus trichocarpa POPTR_0010s13290 I 0.696
SapurV1A.0078s0260 Salix purpurea SapurV1A.0078s0260 I 0.696
SapurV1A.0079s0020 Salix purpurea SapurV1A.0079s0020 I 0.696
GSMUA_Achr3G21060_001 Musa acuminata GSMUA_Achr3G21060_001 I 0.695
Lus10034338.g Linum usitatissimum Lus10034338.g I 0.695
POPTR_0012s05200 Populus trichocarpa POPTR_0012s05200 I 0.694
POPTR_0015s03770 Populus trichocarpa POPTR_0015s03770 I 0.694
28271.m000023 Ricinus communis 28271.m000023 I 0.694
evm.TU.supercontig_3.501 Carica papaya evm.TU.supercontig_3.501 I 0.694
evm.TU.supercontig_3.502 Carica papaya evm.TU.supercontig_3.502 I 0.694
SapurV1A.0530s0020 Salix purpurea SapurV1A.0530s0020 I 0.694
SapurV1A.0989s0120 Salix purpurea SapurV1A.0989s0120 I 0.694
SapurV1A.1621s0010 Salix purpurea SapurV1A.1621s0010 I 0.694
SapurV1A.2885s0020 Salix purpurea SapurV1A.2885s0020 I 0.694
GLYMA07G10321 Glycine max GLYMA07G10321 I 0.693
GSMUA_Achr6G09760_001 Musa acuminata GSMUA_Achr6G09760_001 I 0.693
VIT_17s0000g03560 Vitis vinifera VIT_17s0000g03560 I 0.692
SapurV1A.0294s0070 Salix purpurea SapurV1A.0294s0070 I 0.692
MYB62 Arabidopsis thaliana AT1G68320 D 0.691
Bo2g057760 Brassica oleracea Bo2g057760 I 0.691
Bo6g106730 Brassica oleracea Bo6g106730 I 0.691
Bra004297 Brassica rapa Bra004297 I 0.691
MYB62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001171 I 0.691
Cucsa.365190 Cucumis sativus Cucsa.365190 I 0.691
Thhalv10018962m.g Eutrema salsugineum Thhalv10018962m.g I 0.691
Bo5g043390 Brassica oleracea Bo5g043390 I 0.690
Bo6g097180 Brassica oleracea Bo6g097180 I 0.690
Bra033948 Brassica rapa Bra033948 I 0.690
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.690
Aquca_003_00440 Aquilegia coerulea Aquca_003_00440 I 0.690
POPTR_0014s11230 Populus trichocarpa POPTR_0014s11230 I 0.689
TCM_012363 Theobroma cacao TCM_012363 I 0.688
GSMUA_AchrUn_randomG08600_001 Musa acuminata GSMUA_AchrUn_randomG08600_001 I 0.687
PRUPE_ppa025672mg Prunus persica PRUPE_ppa025672mg I 0.687
cassava46139.m1 Manihot esculenta cassava46139.m1 I 0.687
gene05018-v1.0-hybrid Fragaria vesca gene05018-v1.0-hybrid I 0.687
MDP0000274300 Malus domestica MDP0000274300 I 0.687
Cucsa.213510 Cucumis sativus Cucsa.213510 I 0.686
cassava28986.valid.m1 Manihot esculenta cassava28986.valid.m1 I 0.685
Thhalv10008403m.g Eutrema salsugineum Thhalv10008403m.g I 0.684
PRUPE_ppa008877mg Prunus persica PRUPE_ppa008877mg I 0.683
Pm025177 Prunus mume Pm025177 I 0.683
MDP0000259898 Malus domestica MDP0000259898 I 0.683
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I 0.682
GSMUA_Achr8G18460_001 Musa acuminata GSMUA_Achr8G18460_001 I 0.682
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I 0.682
MLOC_66662 Hordeum vulgare MLOC_66662 I 0.682
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I 0.682
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I 0.682
Bra004041 Brassica rapa Bra004041 I 0.681
GLYMA09G03690 Glycine max GLYMA09G03690 I 0.681
GLYMA15G14620 Glycine max GLYMA15G14620 I 0.681
MTR_2g033170 Medicago truncatula MTR_2g033170 I 0.681
Bostr.12659s0423 Boechera stricta Bostr.12659s0423 I 0.681
Cagra.2231s0026 Capsella grandiflora Cagra.2231s0026 I 0.681
Cagra.1111s0025 Capsella grandiflora Cagra.1111s0025 I 0.680
Carubv10021411m.g Capsella rubella Carubv10021411m.g I 0.680
GSMUA_Achr10G19840_001 Musa acuminata GSMUA_Achr10G19840_001 I 0.678
MLOC_68593 Hordeum vulgare MLOC_68593 I 0.678
PRUPE_ppa009143mg Prunus persica PRUPE_ppa009143mg I 0.678
Traes_1AL_91299CB97 Triticum aestivum Traes_1AL_91299CB97 I 0.678
Pm029082 Prunus mume Pm029082 I 0.678
GSMUA_Achr1G21020_001 Musa acuminata GSMUA_Achr1G21020_001 I 0.676
Gorai.006G060300 Gossypium raimondii Gorai.006G060300 I 0.676
MYB116 Arabidopsis thaliana AT1G25340 D 0.675
GSMUA_Achr7G05570_001 Musa acuminata GSMUA_Achr7G05570_001 I 0.675
Solyc12g099130.1 Solanum lycopersicum Solyc12g099130.1 I 0.675
Cla018782 Citrullus lanatus Cla018782 I 0.675
Cucsa.121500 Cucumis sativus Cucsa.121500 I 0.675
Bostr.26959s0063 Boechera stricta Bostr.26959s0063 I 0.675
BGIOSGA010857 Oryza indica BGIOSGA010857 I 0.674
LPERR03G13320 Leersia perrieri LPERR03G13320 I 0.674
OB03G25040 Oryza brachyantha OB03G25040 I 0.674
ORGLA03G0145100 Oryza glaberrima ORGLA03G0145100 I 0.674
MYB2 Oryza sativa OS03G0315400 I 0.674
Ciclev10005387m.g Citrus clementina Ciclev10005387m.g I 0.674
orange1.1g019911m.g Citrus sinensis orange1.1g019911m.g I 0.674
PK22268.1 Cannabis sativa PK22268.1 I 0.674
Cla008412 Citrullus lanatus Cla008412 I 0.673
BGIOSGA018863 Oryza indica BGIOSGA018863 I 0.672
GLYMA05G35050 Glycine max GLYMA05G35050 I 0.672
MTR_1g086510 Medicago truncatula MTR_1g086510 I 0.672
OB01G22230 Oryza brachyantha OB01G22230 I 0.672
OGLUM05G02350 Oryza glumaepatula OGLUM05G02350 I 0.672
ONIVA05G02220 Oryza nivara ONIVA05G02220 I 0.672
OPUNC05G02190 Oryza punctata OPUNC05G02190 I 0.672
ORGLA05G0022200 Oryza glaberrima ORGLA05G0022200 I 0.672
ORUFI05G02420 Oryza rufipogon ORUFI05G02420 I 0.672
PGSC0003DMG402004611 Solanum tuberosum PGSC0003DMG402004611 I 0.672
Ca_03536 Cicer arietinum Ca_03536 I 0.672
cassava33046.m1 Manihot esculenta cassava33046.m1 I 0.672
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.672
BGIOSGA020382 Oryza indica BGIOSGA020382 I 0.671
Pm008425 Prunus mume Pm008425 I 0.671
OB11G27320 Oryza brachyantha OB11G27320 I 0.669
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.669
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I 0.669
OS01G0128000 Oryza sativa OS01G0128000 I 0.669
JAMYB Oryza sativa OS11G0684000 I 0.669
Solyc05g053330.2 Solanum lycopersicum Solyc05g053330.2 I 0.669
Eucgr.B03006 Eucalyptus grandis Eucgr.B03006 I 0.669
evm.TU.contig_30289.2 Carica papaya evm.TU.contig_30289.2 I 0.669
Gorai.005G068900 Gossypium raimondii Gorai.005G068900 I 0.669
Gorai.011G203900 Gossypium raimondii Gorai.011G203900 I 0.669
GSMUA_Achr11G20830_001 Musa acuminata GSMUA_Achr11G20830_001 I 0.668
ATMYB2 Vitis vinifera VIT_07s0005g01950 I 0.668
Gorai.008G287100 Gossypium raimondii Gorai.008G287100 I 0.668
MDP0000167107 Malus domestica MDP0000167107 I 0.668
GLYMA10G01330 Glycine max GLYMA10G01330 I 0.667
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.667
LPERR01G11480 Leersia perrieri LPERR01G11480 I 0.667
30076.m004607 Ricinus communis 30076.m004607 I 0.667
BGIOSGA035999 Oryza indica BGIOSGA035999 I 0.666
F775_02242 Aegilops tauschii F775_02242 I 0.666
GRMZM2G143046 Zea mays GRMZM2G143046 I 0.666
GSMUA_AchrUn_randomG27010_001 Musa acuminata GSMUA_AchrUn_randomG27010_001 I 0.666
OB12G22880 Oryza brachyantha OB12G22880 I 0.666
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I 0.666
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I 0.666
PGSC0003DMG400008761 Solanum tuberosum PGSC0003DMG400008761 I 0.666
Sb08g018370 Sorghum bicolor Sb08g018370 I 0.666
Si022831m.g Setaria italica Si022831m.g I 0.666
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.666
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I 0.666
Ciclev10021157m.g Citrus clementina Ciclev10021157m.g I 0.665
orange1.1g020603m.g Citrus sinensis orange1.1g020603m.g I 0.665
Pavir.Eb01665 Panicum virgatum Pavir.Eb01665 N 0.665
PGSC0003DMG400027157 Solanum tuberosum PGSC0003DMG400027157 I 0.664
mgf013798m Mimulus guttatus mgf013798m I 0.664
gene25149-v1.0-hybrid Fragaria vesca gene25149-v1.0-hybrid I 0.664
F775_17094 Aegilops tauschii F775_17094 I 0.663
GLYMA03G38040 Glycine max GLYMA03G38040 I 0.663
GLYMA19G40650 Glycine max GLYMA19G40650 I 0.663
Sb01g037110 Sorghum bicolor Sb01g037110 I 0.663
Si035722m.g Setaria italica Si035722m.g I 0.663
Solyc12g099140.1 Solanum lycopersicum Solyc12g099140.1 I 0.663
Traes_4BS_F83CB32DD Triticum aestivum Traes_4BS_F83CB32DD I 0.663
Traes_4DS_2A5B4C4C4 Triticum aestivum Traes_4DS_2A5B4C4C4 I 0.663
Cla013880 Citrullus lanatus Cla013880 I 0.663
Pavir.J28445 Panicum virgatum Pavir.J28445 I 0.663
Pavir.J39490 Panicum virgatum Pavir.J39490 I 0.663
BRADI2G01960 Brachypodium distachyon BRADI2G01960 I 0.662
Eucgr.H04082 Eucalyptus grandis Eucgr.H04082 I 0.662
PGSC0003DMG401004611 Solanum tuberosum PGSC0003DMG401004611 I 0.661
Cucsa.252400 Cucumis sativus Cucsa.252400 I 0.661
Gorai.004G145800 Gossypium raimondii Gorai.004G145800 I 0.661
MDP0000812154 Malus domestica MDP0000812154 I 0.661