Cucsa.244650 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.244650 T284474_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.723 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.689 0.710
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.677 0.796
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.677 0.796
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.674 0.731
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.672 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.244650.1 Myb 12 58
Cucsa.244650.1 Myb 64 109

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla013306 Citrullus lanatus Cla013306 I 0.770
29801.m003096 Ricinus communis 29801.m003096 I 0.760
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.743
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.739
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.739
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.733
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.730
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.723
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.723
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.723
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.723
PK12959.1 Cannabis sativa PK12959.1 I 0.723
PK07741.1 Cannabis sativa PK07741.1 D 0.723
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.723
MDP0000478512 Malus domestica MDP0000478512 I 0.723
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.721
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.720
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.720
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.720
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.720
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.720
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.718
TCM_042629 Theobroma cacao TCM_042629 I 0.716
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.716
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.716
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.715
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.714
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.714
Cla020946 Citrullus lanatus Cla020946 I 0.713
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.713
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.713
Pm021211 Prunus mume Pm021211 I 0.713
Pm018862 Prunus mume Pm018862 I 0.712
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.711
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.711
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.710
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.710
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.710
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.710
Si032789m.g Setaria italica Si032789m.g I 0.710
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.710
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.710
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.710
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.710
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.710
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.710
OB09G10200 Oryza brachyantha OB09G10200 I 0.710
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.710
OS09G0106700 Oryza sativa OS09G0106700 I 0.710
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.710
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.710
OBART09G00310 Oryza barthii OBART09G00310 I 0.710
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.710
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.709
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.709
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.709
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.708
MDP0000284922 Malus domestica MDP0000284922 I 0.708
mgf018580m Mimulus guttatus mgf018580m I 0.707
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.706
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.702
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.700
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.700
Si001686m.g Setaria italica Si001686m.g I 0.698
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.698
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.697
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.696
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.694
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.694
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.694
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.694
TCM_000696 Theobroma cacao TCM_000696 I 0.694
MDP0000319124 Malus domestica MDP0000319124 I 0.693
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.693
Cla018417 Citrullus lanatus Cla018417 I 0.693
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.693
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.693
MDP0000203733 Malus domestica MDP0000203733 I 0.693
PK16550.1 Cannabis sativa PK16550.1 I 0.693
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.693
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.691
MDP0000187872 Malus domestica MDP0000187872 I 0.691
Si017917m.g Setaria italica Si017917m.g I 0.691
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.691
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.691
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.691
mgf025567m Mimulus guttatus mgf025567m I 0.691
PK17282.1 Cannabis sativa PK17282.1 I 0.691
TCM_007138 Theobroma cacao TCM_007138 I 0.690
TCM_021796 Theobroma cacao TCM_021796 I 0.690
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.690
27798.m000612 Ricinus communis 27798.m000612 I 0.690
Pm002576 Prunus mume Pm002576 I 0.690
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I 0.690
Carubv10017397m.g Capsella rubella Carubv10017397m.g I 0.690
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.690
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.690
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.690
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.690
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.689
MYB1 Arabidopsis thaliana AT3G09230 D 0.689
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.688
MDP0000807341 Malus domestica MDP0000807341 I 0.688
30170.m013698 Ricinus communis 30170.m013698 I 0.685
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.685
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.685
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.685
Bo4g151410 Brassica oleracea Bo4g151410 I 0.685
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.685
Pm005332 Prunus mume Pm005332 I 0.685
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.685
MDP0000463846 Malus domestica MDP0000463846 I 0.685
Bra032176 Brassica rapa Bra032176 I 0.685
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.684
mgf023922m Mimulus guttatus mgf023922m I 0.683
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.683
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.683
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.683
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.682
MDP0000275800 Malus domestica MDP0000275800 I 0.681
mgf002573m Mimulus guttatus mgf002573m I 0.681
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.680
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.679
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.679
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.678
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.678
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.678
Carubv10023692m.g Capsella rubella Carubv10023692m.g I 0.677
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.677
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.677
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.677
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.677
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.677
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.676
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.676
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I 0.675
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.675
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.674
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.674
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.674
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.674
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.674
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.674
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.674
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.674
OS02G0187700 Oryza sativa OS02G0187700 D 0.674
GLYMA04G04490 Glycine max GLYMA04G04490 I 0.673
Bo3g153550 Brassica oleracea Bo3g153550 I 0.673
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.673
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.673
OLONG_001357 Oryza longistaminata OLONG_001357 I 0.672
BGIOSGA000485 Oryza indica BGIOSGA000485 I 0.672
MYB73 Arabidopsis thaliana AT4G37260 D 0.672
Bra011749 Brassica rapa Bra011749 I 0.672
OS01G0850400 Oryza sativa OS01G0850400 I 0.672
OPUNC01G36300 Oryza punctata OPUNC01G36300 I 0.672
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I 0.672
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I 0.672
Bo1g004900 Brassica oleracea Bo1g004900 I 0.672
OMERI01G34370 Oryza meridionalis OMERI01G34370 I 0.672
ONIVA01G42300 Oryza nivara ONIVA01G42300 I 0.672
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.672
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.672
OBART01G37390 Oryza barthii OBART01G37390 I 0.672
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.672
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I 0.672
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.670
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.670
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.670
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.670
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.670
MDP0000232454 Malus domestica MDP0000232454 I 0.670
MDP0000196986 Malus domestica MDP0000196986 I 0.670
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I 0.670
Bra010593 Brassica rapa Bra010593 I 0.670
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.670
29970.m000987 Ricinus communis 29970.m000987 I 0.670
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I 0.670
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.670
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.669
mgf014089m Mimulus guttatus mgf014089m I 0.669
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.668
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.668
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.668
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.668
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I 0.668
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.668
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.668
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.668
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.668
Cla022947 Citrullus lanatus Cla022947 I 0.668
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I 0.668
Cucsa.395890 Cucumis sativus Cucsa.395890 I 0.668
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.668
Bo3g062160 Brassica oleracea Bo3g062160 I 0.667
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.667
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.667
Cla022889 Citrullus lanatus Cla022889 I 0.666
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.666
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.666
Ca_12468 Cicer arietinum Ca_12468 I 0.666
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.666
PK29071.1 Cannabis sativa PK29071.1 I 0.666
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.666
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.666
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.666
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.666
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.665
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.664
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I 0.663
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.663
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I 0.663
Bo2g167960 Brassica oleracea Bo2g167960 I 0.663
evm.TU.supercontig_19.155 Carica papaya evm.TU.supercontig_19.155 I 0.663
TCM_033907 Theobroma cacao TCM_033907 I 0.662
GLYMA14G09540 Glycine max GLYMA14G09540 I 0.661
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.661