TCM_033907 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_033907 T280599_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.746 0.774
MYB1
M07068_2.00 		Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD		 Dap-seq
OMalley et al.(2016)
MYB1_col_a 		0.690 0.720
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.675 0.731
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.666 0.763
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.662 0.753
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.662 0.742
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.662 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY14580 Myb 35 81
EOY14580 Myb 87 132

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla022889 Citrullus lanatus Cla022889 I 0.905
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.905
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I 0.860
PK29071.1 Cannabis sativa PK29071.1 I 0.858
30170.m013927 Ricinus communis 30170.m013927 I 0.851
cassava16103.m1 Manihot esculenta cassava16103.m1 I 0.851
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I 0.851
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I 0.851
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.850
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.839
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.837
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.837
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I 0.834
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.833
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I 0.832
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I 0.830
cassava46434.m1 Manihot esculenta cassava46434.m1 I 0.830
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.825
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I 0.819
Pm005220 Prunus mume Pm005220 I 0.819
Cucsa.123440 Cucumis sativus Cucsa.123440 I 0.819
MDP0000894463 Malus domestica MDP0000894463 I 0.819
mgf006151m Mimulus guttatus mgf006151m I 0.811
GLYMA04G03910 Glycine max GLYMA04G03910 I 0.810
mgf003084m Mimulus guttatus mgf003084m I 0.809
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I 0.802
GLYMA06G04010 Glycine max GLYMA06G04010 I 0.801
Ca_01522 Cicer arietinum Ca_01522 I 0.797
Cla021015 Citrullus lanatus Cla021015 I 0.794
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I 0.794
Lus10021762.g Linum usitatissimum Lus10021762.g I 0.794
MDP0000477900 Malus domestica MDP0000477900 I 0.792
MDP0000480596 Malus domestica MDP0000480596 I 0.792
MDP0000641708 Malus domestica MDP0000641708 I 0.792
MDP0000784297 Malus domestica MDP0000784297 I 0.792
MDP0000823270 Malus domestica MDP0000823270 I 0.792
Lus10032764.g Linum usitatissimum Lus10032764.g I 0.790
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.776
Si032789m.g Setaria italica Si032789m.g I 0.776
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.776
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.772
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.772
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.772
OB09G10200 Oryza brachyantha OB09G10200 I 0.772
OBART09G00310 Oryza barthii OBART09G00310 I 0.772
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.772
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.772
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.772
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.772
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.772
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.772
OS09G0106700 Oryza sativa OS09G0106700 I 0.772
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.772
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.772
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I 0.772
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.763
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.763
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.763
Si017917m.g Setaria italica Si017917m.g I 0.763
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.763
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.763
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.759
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I 0.751
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I 0.748
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.747
29801.m003096 Ricinus communis 29801.m003096 I 0.747
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.747
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.746
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.746
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.746
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.746
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.746
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.746
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.746
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.746
OS02G0187700 Oryza sativa OS02G0187700 D 0.746
mgf025567m Mimulus guttatus mgf025567m I 0.745
GLYMA17G36370 Glycine max GLYMA17G36370 I 0.744
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I 0.744
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.744
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.739
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.739
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.738
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.738
LPERR06G18380 Leersia perrieri LPERR06G18380 I 0.734
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.731
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.730
TCM_007138 Theobroma cacao TCM_007138 I 0.728
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I 0.727
Sb10g024950 Sorghum bicolor Sb10g024950 I 0.726
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.723
GLYMA05G21220 Glycine max GLYMA05G21220 I 0.722
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.720
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.719
BGIOSGA020819 Oryza indica BGIOSGA020819 I 0.717
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I 0.717
OMERI06G22090 Oryza meridionalis OMERI06G22090 I 0.717
ONIVA06G26080 Oryza nivara ONIVA06G26080 I 0.717
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I 0.717
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I 0.717
OS06G0637500 Oryza sativa OS06G0637500 I 0.717
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.712
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.711
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.711
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.710
GRMZM5G803308 Zea mays GRMZM5G803308 I 0.709
Si006938m.g Setaria italica Si006938m.g I 0.709
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.709
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.709
Pavir.Da00404 Panicum virgatum Pavir.Da00404 I 0.709
Pavir.Db00693 Panicum virgatum Pavir.Db00693 I 0.709
CM0528.210.nd Lotus japonicus CM0528.210.nd I 0.709
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.708
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.706
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.706
GRMZM2G078820 Zea mays GRMZM2G078820 I 0.704
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.703
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.703
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.703
30170.m013698 Ricinus communis 30170.m013698 I 0.703
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.703
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.703
PK17282.1 Cannabis sativa PK17282.1 I 0.703
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.700
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.700
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.700
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.700
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.700
TCM_021796 Theobroma cacao TCM_021796 I 0.700
Cla018417 Citrullus lanatus Cla018417 I 0.700
Pm002576 Prunus mume Pm002576 I 0.700
27798.m000612 Ricinus communis 27798.m000612 I 0.700
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.700
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.700
mgf023922m Mimulus guttatus mgf023922m I 0.697
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.694
Cla020946 Citrullus lanatus Cla020946 I 0.694
Pm005332 Prunus mume Pm005332 I 0.694
MDP0000463846 Malus domestica MDP0000463846 I 0.694
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.692
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.692
Bo4g151410 Brassica oleracea Bo4g151410 I 0.691
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I 0.691
Cla014191 Citrullus lanatus Cla014191 I 0.691
Cucsa.102710 Cucumis sativus Cucsa.102710 I 0.691
MYB1 Arabidopsis thaliana AT3G09230 D 0.690
MDP0000275800 Malus domestica MDP0000275800 I 0.690
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I 0.689
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.689
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I 0.688
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I 0.688
TCM_000696 Theobroma cacao TCM_000696 I 0.688
29970.m000987 Ricinus communis 29970.m000987 I 0.688
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I 0.688
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I 0.688
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I 0.688
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.688
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.687
OPUNC06G19910 Oryza punctata OPUNC06G19910 I 0.687
mgf015566m Mimulus guttatus mgf015566m I 0.687
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.686
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.686
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I 0.686
MLOC_63964 Hordeum vulgare MLOC_63964 I 0.685
Traes_7DL_1FA87027B Triticum aestivum Traes_7DL_1FA87027B I 0.685
TRIUR3_25447 Triticum urartu TRIUR3_25447 I 0.685
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.685
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.684
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.684
GLYMA17G35620 Glycine max GLYMA17G35620 I 0.684
MTR_5g082910 Medicago truncatula MTR_5g082910 I 0.684
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I 0.684
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.684
Bo3g153550 Brassica oleracea Bo3g153550 I 0.683
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I 0.683
MDP0000187872 Malus domestica MDP0000187872 I 0.682
mgf018580m Mimulus guttatus mgf018580m I 0.681
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.680
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.680
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.680
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.680
PK12959.1 Cannabis sativa PK12959.1 I 0.680
MTR_5g016510 Medicago truncatula MTR_5g016510 I 0.679
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I 0.679
TCM_042629 Theobroma cacao TCM_042629 I 0.679
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I 0.679
Ca_02182 Cicer arietinum Ca_02182 I 0.679
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I 0.679
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I 0.679
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.679
MDP0000196986 Malus domestica MDP0000196986 I 0.679
MDP0000232454 Malus domestica MDP0000232454 I 0.679
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.678
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.678
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.678
MDP0000478512 Malus domestica MDP0000478512 I 0.678
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I 0.677
Cucsa.352560 Cucumis sativus Cucsa.352560 I 0.677
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I 0.677
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I 0.677
MDP0000203733 Malus domestica MDP0000203733 I 0.675
MDP0000319124 Malus domestica MDP0000319124 I 0.675
PK07741.1 Cannabis sativa PK07741.1 D 0.675
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I 0.674
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.674
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.673
Pm021211 Prunus mume Pm021211 I 0.673
Bra010593 Brassica rapa Bra010593 I 0.672
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.672
MDP0000284922 Malus domestica MDP0000284922 I 0.672
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.672
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.671
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I 0.671
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I 0.671
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.670
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.670
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.670
mgf025114m Mimulus guttatus mgf025114m N 0.669
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.669
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.669
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.668
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.668
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.668
PK16550.1 Cannabis sativa PK16550.1 I 0.667
MYB73 Arabidopsis thaliana AT4G37260 D 0.666
Bo1g004900 Brassica oleracea Bo1g004900 I 0.666
Bra011749 Brassica rapa Bra011749 I 0.666
Bra032176 Brassica rapa Bra032176 I 0.666
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I 0.666
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.666
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.666
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I 0.666
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I 0.666
Carubv10007638m.g Capsella rubella Carubv10007638m.g I 0.666
Pm018862 Prunus mume Pm018862 I 0.665
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I 0.665
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.664
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.664
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I 0.663
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I 0.663
AtMYB70 Arabidopsis thaliana AT2G23290 D 0.662
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I 0.662
GLYMA01G39740 Glycine max GLYMA01G39740 I 0.662
GLYMA11G05550 Glycine max GLYMA11G05550 I 0.662
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I 0.662
Cucsa.244650 Cucumis sativus Cucsa.244650 I 0.662
Lus10010260.g Linum usitatissimum Lus10010260.g I 0.662
Lus10030336.g Linum usitatissimum Lus10030336.g I 0.662
PK28565.1 Cannabis sativa PK28565.1 D 0.662
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I 0.662
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.661
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.661
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.661
gene18756-v1.0-hybrid Fragaria vesca gene18756-v1.0-hybrid I 0.661