CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.066910
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.066910
T284370_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.784
0.925
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.706
0.774
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.693
0.774
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.066910.1
Myb
57
103
KGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQL
Cucsa.066910.1
Myb
109
154
RKPFTDEEDRIIVAAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTL
Cucsa.066910.2
Myb
57
103
KGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQL
Cucsa.066910.2
Myb
109
154
RKPFTDEEDRIIVAAHAVHGNKWAAIARLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
211 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla018417
Citrullus lanatus
Cla018417
I
0.909
27798.m000612
Ricinus communis
27798.m000612
I
0.886
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.881
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.877
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.868
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.868
TCM_021796
Theobroma cacao
TCM_021796
I
0.863
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.861
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.859
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.850
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.849
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.846
mgf015566m
Mimulus guttatus
mgf015566m
I
0.845
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.839
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.839
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.836
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.835
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
0.831
PK12959.1
Cannabis sativa
PK12959.1
I
0.830
TCM_042629
Theobroma cacao
TCM_042629
I
0.828
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.828
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.826
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.826
Pm002576
Prunus mume
Pm002576
I
0.823
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.820
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.817
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.816
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.816
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.814
MDP0000203733
Malus domestica
MDP0000203733
I
0.810
MDP0000319124
Malus domestica
MDP0000319124
I
0.810
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.810
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.805
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.803
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.803
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.803
Pm018862
Prunus mume
Pm018862
I
0.798
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.795
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.794
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.792
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.784
PK07741.1
Cannabis sativa
PK07741.1
D
0.784
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
0.784
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.781
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.778
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.778
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
0.776
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.774
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.774
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.772
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.772
MDP0000284922
Malus domestica
MDP0000284922
I
0.770
mgf018580m
Mimulus guttatus
mgf018580m
I
0.765
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.764
Si001686m.g
Setaria italica
Si001686m.g
I
0.764
MDP0000478512
Malus domestica
MDP0000478512
I
0.760
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.759
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.758
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.756
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.756
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.754
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.754
MDP0000807341
Malus domestica
MDP0000807341
I
0.753
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
0.752
MYB109
Arabidopsis thaliana
AT3G55730
I
0.749
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.748
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.748
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.748
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.746
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.744
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.744
OB01G46120
Oryza brachyantha
OB01G46120
I
0.743
GLYMA02G42030
Glycine max
GLYMA02G42030
I
0.740
Bra005006
Brassica rapa
Bra005006
I
0.736
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.735
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
0.734
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.733
gene18756-v1.0-hybrid
Fragaria vesca
gene18756-v1.0-hybrid
I
0.732
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.731
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.730
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.730
Bra007186
Brassica rapa
Bra007186
I
0.729
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.727
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.721
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.720
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.719
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.718
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.718
PK16550.1
Cannabis sativa
PK16550.1
I
0.715
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.714
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.714
BGIOSGA000485
Oryza indica
BGIOSGA000485
I
0.713
OGLUM01G41330
Oryza glumaepatula
OGLUM01G41330
I
0.713
OBART01G37390
Oryza barthii
OBART01G37390
I
0.713
OLONG_001357
Oryza longistaminata
OLONG_001357
I
0.713
OMERI01G34370
Oryza meridionalis
OMERI01G34370
I
0.713
OS01G0850400
Oryza sativa
OS01G0850400
I
0.713
ORGLA01G0312200
Oryza glaberrima
ORGLA01G0312200
I
0.713
OPUNC01G36300
Oryza punctata
OPUNC01G36300
I
0.713
ONIVA01G42300
Oryza nivara
ONIVA01G42300
I
0.713
ORUFI01G40770
Oryza rufipogon
ORUFI01G40770
I
0.713
29801.m003096
Ricinus communis
29801.m003096
I
0.711
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.709
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.708
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.708
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.706
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.706
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.706
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.706
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.706
OS02G0187700
Oryza sativa
OS02G0187700
D
0.706
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.706
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.706
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.706
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.706
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.706
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.706
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.706
Si017917m.g
Setaria italica
Si017917m.g
I
0.706
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.706
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.705
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.705
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.705
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.705
Cla022889
Citrullus lanatus
Cla022889
I
0.704
PK29071.1
Cannabis sativa
PK29071.1
I
0.704
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.704
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.704
MYB25
Arabidopsis thaliana
AT2G39880
I
0.702
Cla013306
Citrullus lanatus
Cla013306
I
0.702
29814.m000736
Ricinus communis
29814.m000736
I
0.701
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.701
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.700
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.700
mgf006151m
Mimulus guttatus
mgf006151m
I
0.700
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.700
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.700
TCM_033907
Theobroma cacao
TCM_033907
I
0.700
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.698
Cla004431
Citrullus lanatus
Cla004431
I
0.695
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.695
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.695
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.695
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.695
Pm021211
Prunus mume
Pm021211
I
0.695
Si032789m.g
Setaria italica
Si032789m.g
I
0.695
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.695
MYB1
Arabidopsis thaliana
AT3G09230
D
0.693
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.693
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.693
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.693
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.692
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.691
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.691
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.691
OB09G10200
Oryza brachyantha
OB09G10200
I
0.691
OBART09G00310
Oryza barthii
OBART09G00310
I
0.691
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.691
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.691
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.691
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.691
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.691
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.691
mgf020432m
Mimulus guttatus
mgf020432m
I
0.691
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.691
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.691
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.691
OS09G0106700
Oryza sativa
OS09G0106700
I
0.691
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.691
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.691
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.690
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.690
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.690
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.689
Ca_12468
Cicer arietinum
Ca_12468
I
0.688
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
0.688
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.687
POPTR_0009s09890
Populus trichocarpa
POPTR_0009s09890
I
0.683
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.683
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.679
SapurV1A.0708s0130
Salix purpurea
SapurV1A.0708s0130
I
0.679
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.679
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.676
mgf003084m
Mimulus guttatus
mgf003084m
I
0.675
MDP0000298689
Malus domestica
MDP0000298689
I
0.674
MDP0000187872
Malus domestica
MDP0000187872
I
0.673
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.672
mgf025567m
Mimulus guttatus
mgf025567m
I
0.672
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.671
Pm018951
Prunus mume
Pm018951
I
0.671
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.671
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.671
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.671
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.669
mgf002573m
Mimulus guttatus
mgf002573m
I
0.667
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.667
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.666
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.666
Si006938m.g
Setaria italica
Si006938m.g
I
0.666
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.666
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.666
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.666
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.665
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.665
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.664
AMTR_s00006p00225600
Amborella trichopoda
AMTR_s00006p00225600
I
0.664
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.664
Ca_02182
Cicer arietinum
Ca_02182
I
0.664
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.663
Bra034057
Brassica rapa
Bra034057
I
0.662