Bra036327 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra036327 T292691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC69
M07216_2.00 		Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW		 Dap-seq
OMalley et al.(2016)
NTM2_col_b 		0.955 0.722
NAC68
M07214_2.00 		Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY		 Dap-seq
OMalley et al.(2016)
NTM1_col_a 		0.952 0.704
NAC68
M07215_2.00 		Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD		 Dap-seq
OMalley et al.(2016)
NTM1_colamp_a 		0.952 0.704
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra036327.1-P NAC/NAM 5 136

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g004100 Brassica oleracea Bo9g004100 I 0.992
Bo00853s060 Brassica oleracea Bo00853s060 I 0.975
Bra008553 Brassica rapa Bra008553 I 0.966
Carubv10003260m.g Capsella rubella Carubv10003260m.g I 0.965
Bo9g004110 Brassica oleracea Bo9g004110 I 0.964
Bra036326 Brassica rapa Bra036326 I 0.962
Bostr.4825s0023 Boechera stricta Bostr.4825s0023 I 0.960
Carubv10000489m.g Capsella rubella Carubv10000489m.g I 0.956
Thhalv10028684m.g Eutrema salsugineum Thhalv10028684m.g I 0.956
NAC69 Arabidopsis thaliana AT4G01550 D 0.955
anac069 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6002854 I 0.955
anac067 Arabidopsis thaliana AT4G01520 I 0.952
NAC68 Arabidopsis thaliana AT4G01540 D 0.952
Bo6g119080 Brassica oleracea Bo6g119080 I 0.952
Bo9g004090 Brassica oleracea Bo9g004090 I 0.952
Cagra.12529s0001 Capsella grandiflora Cagra.12529s0001 I 0.933
MDP0000575835 Malus domestica MDP0000575835 I 0.921
Bra036328 Brassica rapa Bra036328 I 0.919
Bo9g004070 Brassica oleracea Bo9g004070 I 0.916
Bostr.4825s0021 Boechera stricta Bostr.4825s0021 I 0.914
POPTR_0014s10330 Populus trichocarpa POPTR_0014s10330 I 0.911
POPTR_0014s10350 Populus trichocarpa POPTR_0014s10350 I 0.908
POPTR_0014s10360 Populus trichocarpa POPTR_0014s10360 I 0.908
Bostr.5325s0009 Boechera stricta Bostr.5325s0009 I 0.908
SapurV1A.0003s0330 Salix purpurea SapurV1A.0003s0330 I 0.907
Bostr.10064s0010 Boechera stricta Bostr.10064s0010 I 0.906
MDP0000214515 Malus domestica MDP0000214515 I 0.903
SapurV1A.0321s0350 Salix purpurea SapurV1A.0321s0350 I 0.901
SapurV1A.0321s0340 Salix purpurea SapurV1A.0321s0340 I 0.900
SapurV1A.0321s0360 Salix purpurea SapurV1A.0321s0360 I 0.900
POPTR_0002s18310 Populus trichocarpa POPTR_0002s18310 I 0.899
POPTR_0002s18290 Populus trichocarpa POPTR_0002s18290 I 0.896
POPTR_0014s07210 Populus trichocarpa POPTR_0014s07210 I 0.892
Bra027596 Brassica rapa Bra027596 I 0.888
Bostr.5325s0019 Boechera stricta Bostr.5325s0019 I 0.882
ANAC001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000119 I 0.880
SapurV1A.0586s0170 Salix purpurea SapurV1A.0586s0170 I 0.879
MDP0000311190 Malus domestica MDP0000311190 I 0.877
SapurV1A.0162s0450 Salix purpurea SapurV1A.0162s0450 I 0.876
GSMUA_Achr11G07800_001 Musa acuminata GSMUA_Achr11G07800_001 N 0.873
SapurV1A.0024s0340 Salix purpurea SapurV1A.0024s0340 I 0.872