CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr5.CM0909.760.nc
(
Lotus japonicus
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
chr5.CM0909.760.nc
T299412_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr5.CM0909.760.nc
NAC/NAM
6
133
SPGFRFHPTDEELVGFYLKRRVTGRLFHGDPIGIVDVYKYEPWDLPCLSKMKTRDLEWYFYSGLDKKYGKGSSRTNRATEKGYWKTTGKDRPVNHANRTVGMKKTLVYHFGRAPTGARTNWVMHEYRS
Links
Other
NAC/NAM
family TFs
Other
Lotus japonicus
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla020837
Citrullus lanatus
Cla020837
I
0.922
Cucsa.308770
Cucumis sativus
Cucsa.308770
I
0.922
cassava22911.valid.m1
Manihot esculenta
cassava22911.valid.m1
I
0.915
PK11467.1
Cannabis sativa
PK11467.1
I
0.915
MDP0000457996
Malus domestica
MDP0000457996
I
0.913
MDP0000695714
Malus domestica
MDP0000695714
I
0.913
PRUPE_ppa003239mg
Prunus persica
PRUPE_ppa003239mg
I
0.910
Pm017550
Prunus mume
Pm017550
I
0.910
Ciclev10031147m.g
Citrus clementina
Ciclev10031147m.g
I
0.905
orange1.1g007598m.g
Citrus sinensis
orange1.1g007598m.g
I
0.905
28872.m000248
Ricinus communis
28872.m000248
I
0.884
Cla013942
Citrullus lanatus
Cla013942
I
0.882
Cucsa.186150
Cucumis sativus
Cucsa.186150
I
0.882
POPTR_0010s23650
Populus trichocarpa
POPTR_0010s23650
I
0.881
SapurV1A.0213s0330
Salix purpurea
SapurV1A.0213s0330
I
0.881
GLYMA20G33390
Glycine max
GLYMA20G33390
N
0.879
Lus10017458.g
Linum usitatissimum
Lus10017458.g
I
0.877