Lus10017458.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10017458.g T298263_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC078
M02372_2.00 		Arabidopsis thaliana
NNRCAMGHMANN
NNTKDCKTGYNN		 PBM
Weirauch et al.(2014)
pTH7209 		0.876 0.825
NAC078
M07226_2.00 		Arabidopsis thaliana
TTDCTTGNDNNDCAAG
CTTGHNNHNCAAGHAA		 Dap-seq
OMalley et al.(2016)
NAC2_colamp_a 		0.876 0.825
NAC078
M07227_2.00 		Arabidopsis thaliana
DTTWCTTGNNNNRCAAG
CTTGYNNNNCAAGWAAH		 Dap-seq
OMalley et al.(2016)
NAC2_col_v3a 		0.876 0.825
NAC078
M11083_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$NAC078_Q2 		0.876 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10017458 NAC/NAM 11 137

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10028824.g Linum usitatissimum Lus10028824.g N 0.967
cassava22911.valid.m1 Manihot esculenta cassava22911.valid.m1 I 0.944
Cla020837 Citrullus lanatus Cla020837 I 0.941
Cucsa.308770 Cucumis sativus Cucsa.308770 I 0.941
PRUPE_ppa003239mg Prunus persica PRUPE_ppa003239mg I 0.930
Pm017550 Prunus mume Pm017550 I 0.930
Ciclev10031147m.g Citrus clementina Ciclev10031147m.g I 0.929
orange1.1g007598m.g Citrus sinensis orange1.1g007598m.g I 0.929
MDP0000457996 Malus domestica MDP0000457996 I 0.928
MDP0000695714 Malus domestica MDP0000695714 I 0.928
PK11467.1 Cannabis sativa PK11467.1 I 0.926
POPTR_0008s03170 Populus trichocarpa POPTR_0008s03170 I 0.921
POPTR_0010s23650 Populus trichocarpa POPTR_0010s23650 I 0.921
28872.m000248 Ricinus communis 28872.m000248 I 0.921
SapurV1A.0213s0330 Salix purpurea SapurV1A.0213s0330 I 0.921
Cla013942 Citrullus lanatus Cla013942 I 0.912
Cucsa.186150 Cucumis sativus Cucsa.186150 I 0.912
TCM_043360 Theobroma cacao TCM_043360 I 0.877
chr5.CM0909.760.nc Lotus japonicus chr5.CM0909.760.nc N 0.877
NAC078 Arabidopsis thaliana AT5G04410 D 0.876
NAC2 Arabidopsis lyrata scaffold_600382.1 I 0.876
Bostr.2128s0007 Boechera stricta Bostr.2128s0007 I 0.876
Cagra.9217s0021 Capsella grandiflora Cagra.9217s0021 I 0.876
Bo9g180050 Brassica oleracea Bo9g180050 I 0.875
Bra009456 Brassica rapa Bra009456 I 0.875
Bra028790 Brassica rapa Bra028790 I 0.874
SapurV1A.0394s0050 Salix purpurea SapurV1A.0394s0050 I 0.873