CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ANCDUO_05898
(
Ancylostoma duodenale
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
ANCDUO_05898
T312526_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR
YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.783
0.783
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS
SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.783
0.783
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA
TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.783
0.783
PAX1
M03442_2.00
Homo sapiens
DBCANTSAWGCGTGACS
SGTCACGCWTSANTGVH
SELEX
Jolma et al.(2013)
PAX1_1
0.754
0.754
PAX9
M03444_2.00
Homo sapiens
NKCANTSAWGCGTGACS
SGTCACGCWTSANTGMN
SELEX
Jolma et al.(2013)
PAX9_1
0.754
0.754
PAX1
M05687_2.00
Homo sapiens
BCRNTSRWGCGTGACSN
NSGTCACGCWYSANYGV
SELEX
Yin et al.(2017)
PAX1_eDBD_HT-SELEX
0.754
0.754
PAX9
M05689_2.00
Homo sapiens
BHRNYSRDSCGTRACSN
NSGTYACGSHYSRNYDV
SELEX
Yin et al.(2017)
PAX9_eDBD_HT-SELEX
0.754
0.754
PAX1
M11207_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX1_B
0.754
0.754
PAX1
M05688_2.00
Homo sapiens
BCRNTSAWGCGTGACSN
NSGTCACGCWTSANYGV
SELEX
Yin et al.(2017)
PAX1_eDBD_Methyl-HT-SELEX
0.754
0.754
PAX9
M05690_2.00
Homo sapiens
BCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGV
SELEX
Yin et al.(2017)
PAX9_eDBD_Methyl-HT-SELEX
0.754
0.754
pax9
M11204_2.00
Danio rerio
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX9_B
0.739
0.739
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ANCDUO_05898
Paired box
1
69
YVEKGSIEPGTIGGSKPRVTTPKVVEYIRLLKFSDPGIFSWEIRDRLVADGICNKDNVPSASSISRILR
Links
Other
Paired box
family TFs
Other
Ancylostoma duodenale
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_02265
Ancylostoma ceylanicum
ANCCEY_02265
I
0.986
ACAC_0001249001
Angiostrongylus cantonensis
ACAC_0001249001
I
0.942
SVUK_0000340101
Strongylus vulgaris
SVUK_0000340101
I
0.865
NBR_0002110501
Nippostrongylus brasiliensis
NBR_0002110501
I
0.821
DAPPUDRAFT_307722
Daphnia pulex
DAPPUDRAFT_307722
I
0.797
NECAME_07382
Necator americanus
NECAME_07382
I
0.770
MDOA001030
Musca domestica
MDOA001030
I
0.768
ENSXMAG00000019114
Xiphophorus maculatus
ENSXMAG00000019114
I
0.768
pax1a
Danio rerio
ENSDARG00000008203
I
0.768
ENSPFOG00000003208
Poecilia formosa
ENSPFOG00000003208
I
0.768
SMUV_0000337801
Syphacia muris
SMUV_0000337801
I
0.768
ENSSSCG00000001943
Sus scrofa
ENSSSCG00000001943
I
0.754
ENSSTOG00000015730
Ictidomys tridecemlineatus
ENSSTOG00000015730
I
0.754
PAX9
Tupaia belangeri
ENSTBEG00000002460
I
0.754
PAX9
Taeniopygia guttata
ENSTGUG00000012015
I
0.754
ENSONIG00000008137
Oreochromis niloticus
ENSONIG00000008137
I
0.754
ENSSHAG00000005531
Sarcophilus harrisii
ENSSHAG00000005531
I
0.754
Pax9
Rattus norvegicus
ENSRNOG00000008826
I
0.754
ENSPPYG00000005755
Pongo abelii
ENSPPYG00000005755
I
0.754
pax1a
Tetraodon nigroviridis
ENSTNIG00000016891
I
0.754
pax1
Oryzias latipes
ENSORLG00000017412
I
0.754
ENSPSIG00000010961
Pelodiscus sinensis
ENSPSIG00000010961
I
0.754
PAX9
Pan troglodytes
ENSPTRG00000006281
I
0.754
PAX9
Sorex araneus
ENSSARG00000000337
I
0.754
ENSP00000384817-D1
Bos grunniens
ENSP00000384817-D1
I
0.754
pax1
Xenopus tropicalis
XB-GENE-487951
I
0.754
pax9
Xenopus tropicalis
XB-GENE-482238
I
0.754
pax9.L
Xenopus laevis
XB-GENE-864845
I
0.754
TCNE_0001785701
Toxocara canis
TCNE_0001785701
I
0.754
TELCIR_18769
Teladorsagia circumcincta
TELCIR_18769
N
0.754
CLEC012019
Cimex lectularius
CLEC012019
I
0.754
Pvit_17942
Pogona vitticeps
Pvit_17942
I
0.754
Afo_R004464
Aptenodytes forsteri
Afo_R004464
I
0.754
Aan_R005718
Calypte anna
Aan_R005718
I
0.754
ENSP00000355245
Macaca fascicularis
ENSP00000355245
I
0.754
ENSOGAG00000013131
Otolemur garnettii
ENSOGAG00000013131
I
0.754
Ogr19508
Ophisaurus gracilis
Ogr19508
I
0.754
pax1a
Takifugu rubripes
ENSTRUG00000008079
I
0.754
ENSPANG00000000932
Papio anubis
ENSPANG00000000932
I
0.754
PAX9
Canis familiaris
ENSCAFG00000013690
I
0.754
PAX9
Callithrix jacchus
ENSCJAG00000016460
I
0.754
ENSOARG00000008050
Ovis aries
ENSOARG00000008050
I
0.754
PAX9
Gallus gallus
ENSGALG00000010114
I
0.754
PAX9
Bos taurus
ENSBTAG00000009186
I
0.754
ENSAPLG00000014321
Anas platyrhynchos
ENSAPLG00000014321
I
0.754
PAX9
Gorilla gorilla
ENSGGOG00000001528
I
0.754
PAX9
Cavia porcellus
ENSCPOG00000010951
I
0.754
ENSCSAG00000015463
Chlorocebus sabaeus
ENSCSAG00000015463
I
0.754
PAX9
Echinops telfairi
ENSETEG00000002086
I
0.754
PAX9
Equus caballus
ENSECAG00000023712
I
0.754
ENSFALG00000006155
Ficedula albicollis
ENSFALG00000006155
I
0.754
PAX9
Felis catus
ENSFCAG00000001024
I
0.754
pax1a
Gasterosteus aculeatus
ENSGACG00000006987
I
0.754
PAX9
Homo sapiens
ENSG00000198807
D
0.754
PAX9
Dasypus novemcinctus
ENSDNOG00000000352
I
0.754
PAX9
Loxodonta africana
ENSLAFG00000017541
I
0.754
ENSNLEG00000003346
Nomascus leucogenys
ENSNLEG00000003346
I
0.754
ENSAMXG00000018287
Astyanax mexicanus
ENSAMXG00000018287
I
0.754
ENSAMEG00000002906
Ailuropoda melanoleuca
ENSAMEG00000002906
I
0.754
PAX1
Ornithorhynchus anatinus
ENSOANG00000002008
I
0.754
ENSACAG00000001481
Anolis carolinensis
ENSACAG00000001481
I
0.754
PAX9
Ornithorhynchus anatinus
ENSOANG00000014065
I
0.754
ENSAPLG00000012856
Anas platyrhynchos
ENSAPLG00000012856
I
0.754
Pax9
Mus musculus
ENSMUSG00000001497
I
0.754
PAX9
Microcebus murinus
ENSMICG00000010808
I
0.754
ENSMEUG00000002095
Macropus eugenii
ENSMEUG00000002095
I
0.754
PAX9
Myotis lucifugus
ENSMLUG00000011407
I
0.754
PAX9
Macaca mulatta
ENSMMUG00000009648
I
0.754
ENSMPUG00000016259
Mustela putorius furo
ENSMPUG00000016259
I
0.754
PAX9
Monodelphis domestica
ENSMODG00000012681
I
0.754
pax9
Danio rerio
ENSDARG00000053829
D
0.739
ENSAMXG00000002161
Astyanax mexicanus
ENSAMXG00000002161
I
0.739
pax9
Gasterosteus aculeatus
ENSGACG00000011298
I
0.739
ENSLOCG00000013992
Lepisosteus oculatus
ENSLOCG00000013992
I
0.739
ENSGMOG00000009128
Gadus morhua
ENSGMOG00000009128
I
0.739
ENSPMAG00000010414
Petromyzon marinus
ENSPMAG00000010414
I
0.739
ENSPFOG00000017550
Poecilia formosa
ENSPFOG00000017550
I
0.739
ENSONIG00000000990
Oreochromis niloticus
ENSONIG00000000990
I
0.739
pax9
Tetraodon nigroviridis
ENSTNIG00000019284
I
0.739
pax9
Takifugu rubripes
ENSTRUG00000011965
I
0.739
ENSXMAG00000015762
Xiphophorus maculatus
ENSXMAG00000015762
I
0.739
pax-1
Caenorhabditis elegans
WBGene00003937
I
0.739
LotgiG161614
Lottia gigantea
LotgiG161614
I
0.725
estExt_fgenesh2_pg.C_420056
Branchiostoma floridae
estExt_fgenesh2_pg.C_420056
I
0.725
ADAC004542
Anopheles darlingi
ADAC004542
I
0.719
AALB006342
Anopheles albimanus
AALB006342
I
0.719
AARA001120
Anopheles arabiensis
AARA001120
I
0.719