OPUNC04G09650 (Oryza punctata)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 OPUNC04G09650 T321408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC04G09650.1 S1FA 1 56

Links

Other S1FA family TFs
Other Oryza punctata TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G056929 Zea mays GRMZM2G056929 N 0.893
BGIOSGA015143 Oryza indica BGIOSGA015143 N 0.848
OBART04G11650 Oryza barthii OBART04G11650 N 0.848
OGLUM04G11330 Oryza glumaepatula OGLUM04G11330 N 0.848
ONIVA04G09610 Oryza nivara ONIVA04G09610 N 0.848
ORGLA04G0086600 Oryza glaberrima ORGLA04G0086600 N 0.848
ORUFI04G12840 Oryza rufipogon ORUFI04G12840 N 0.848
S1FA2 Oryza sativa OS04G0408700 N 0.848
OB04G18770 Oryza brachyantha OB04G18770 I 0.833
OMERI04G10270 Oryza meridionalis OMERI04G10270 N 0.833
MDP0000559232 Malus domestica MDP0000559232 N 0.804
LPERR04G08400 Leersia perrieri LPERR04G08400 N 0.803
TRIUR3_32840 Triticum urartu TRIUR3_32840 N 0.800
S1FA1 Arabidopsis thaliana AT3G53370 I 0.794
BRADI5G09140 Brachypodium distachyon BRADI5G09140 N 0.788
MLOC_67411 Hordeum vulgare MLOC_67411 N 0.788
Si011030m.g Setaria italica Si011030m.g N 0.788
Pavir.Ga01929 Panicum virgatum Pavir.Ga01929 N 0.788
Pavir.Gb01773 Panicum virgatum Pavir.Gb01773 N 0.788
OB04G18780 Oryza brachyantha OB04G18780 I 0.773
Traes_2AL_65586C538 Triticum aestivum Traes_2AL_65586C538 N 0.773
Traes_2BL_26A5F9082 Triticum aestivum Traes_2BL_26A5F9082 N 0.773
Traes_2DL_032C7FC8C Triticum aestivum Traes_2DL_032C7FC8C N 0.773
BGIOSGA015142 Oryza indica BGIOSGA015142 N 0.758
BGIOSGA015145 Oryza indica BGIOSGA015145 N 0.758
GRMZM2G147424 Zea mays GRMZM2G147424 N 0.758
LPERR04G08410 Leersia perrieri LPERR04G08410 I 0.758
OBART04G11660 Oryza barthii OBART04G11660 N 0.758
OGLUM04G11340 Oryza glumaepatula OGLUM04G11340 N 0.758
OMERI04G10280 Oryza meridionalis OMERI04G10280 N 0.758
ONIVA04G09620 Oryza nivara ONIVA04G09620 N 0.758
OPUNC04G09660 Oryza punctata OPUNC04G09660 N 0.758
ORGLA04G0086800 Oryza glaberrima ORGLA04G0086800 N 0.758
ORUFI04G12850 Oryza rufipogon ORUFI04G12850 N 0.758
OS04G0408900 Oryza sativa OS04G0408900 N 0.758
Sb06g015340 Sorghum bicolor Sb06g015340 N 0.758
PGSC0003DMG400001772 Solanum tuberosum PGSC0003DMG400001772 I 0.750
PGSC0003DMG400020934 Solanum tuberosum PGSC0003DMG400020934 I 0.732
Eucgr.A01168 Eucalyptus grandis Eucgr.A01168 I 0.712