CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G147424
(
Zea mays
)
S1FA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04689 (S1FA)
IPR006779
GRMZM2G147424
T321380_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G147424_P01
S1FA
15
80
EEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE
GRMZM2G147424_P02
S1FA
15
80
EEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE
GRMZM2G147424_P03
S1FA
9
74
EEVNKGLNPGMVVLLVVASFLLLFFAGNYALYVYAQKTLPPKKKKPVSKKKLKREKLKQGVSAPGE
Links
Other
S1FA
family TFs
Other
Zea mays
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G056929
Zea mays
GRMZM2G056929
N
0.970
Sb06g015340
Sorghum bicolor
Sb06g015340
N
0.970
Si011030m.g
Setaria italica
Si011030m.g
N
0.970
Pavir.Gb01773
Panicum virgatum
Pavir.Gb01773
N
0.970
MLOC_67411
Hordeum vulgare
MLOC_67411
N
0.939
BRADI5G09140
Brachypodium distachyon
BRADI5G09140
N
0.924
Traes_2AL_65586C538
Triticum aestivum
Traes_2AL_65586C538
N
0.924
Traes_2BL_26A5F9082
Triticum aestivum
Traes_2BL_26A5F9082
N
0.924
Traes_2DL_032C7FC8C
Triticum aestivum
Traes_2DL_032C7FC8C
N
0.924
Pavir.Ga01929
Panicum virgatum
Pavir.Ga01929
N
0.924
BGIOSGA015143
Oryza indica
BGIOSGA015143
N
0.909
OB04G18770
Oryza brachyantha
OB04G18770
I
0.909
OBART04G11650
Oryza barthii
OBART04G11650
N
0.909
OGLUM04G11330
Oryza glumaepatula
OGLUM04G11330
N
0.909
ONIVA04G09610
Oryza nivara
ONIVA04G09610
N
0.909
ORGLA04G0086600
Oryza glaberrima
ORGLA04G0086600
N
0.909
ORUFI04G12840
Oryza rufipogon
ORUFI04G12840
N
0.909
S1FA2
Oryza sativa
OS04G0408700
N
0.909
LPERR04G08400
Leersia perrieri
LPERR04G08400
N
0.894
OB04G18780
Oryza brachyantha
OB04G18780
I
0.894
OMERI04G10270
Oryza meridionalis
OMERI04G10270
N
0.894
BGIOSGA015142
Oryza indica
BGIOSGA015142
N
0.879
BGIOSGA015145
Oryza indica
BGIOSGA015145
N
0.879
OBART04G11660
Oryza barthii
OBART04G11660
N
0.879
OGLUM04G11340
Oryza glumaepatula
OGLUM04G11340
N
0.879
OMERI04G10280
Oryza meridionalis
OMERI04G10280
N
0.879
ONIVA04G09620
Oryza nivara
ONIVA04G09620
N
0.879
OPUNC04G09660
Oryza punctata
OPUNC04G09660
N
0.879
ORGLA04G0086800
Oryza glaberrima
ORGLA04G0086800
N
0.879
ORUFI04G12850
Oryza rufipogon
ORUFI04G12850
N
0.879
OS04G0408900
Oryza sativa
OS04G0408900
N
0.879
LPERR04G08410
Leersia perrieri
LPERR04G08410
I
0.848
GSMUA_Achr10G13120_001
Musa acuminata
GSMUA_Achr10G13120_001
I
0.833
S1FA1
Arabidopsis thaliana
AT3G53370
I
0.794
Aquca_027_00077
Aquilegia coerulea
Aquca_027_00077
I
0.788
MDP0000559232
Malus domestica
MDP0000559232
N
0.786
GSMUA_Achr6G23400_001
Musa acuminata
GSMUA_Achr6G23400_001
N
0.773
OPUNC04G09650
Oryza punctata
OPUNC04G09650
I
0.758
Eucgr.A01168
Eucalyptus grandis
Eucgr.A01168
I
0.758
Gorai.006G168100
Gossypium raimondii
Gorai.006G168100
I
0.758
MDP0000276000
Malus domestica
MDP0000276000
N
0.758
GSMUA_Achr3G17900_001
Musa acuminata
GSMUA_Achr3G17900_001
N
0.742
PRUPE_ppa014157mg
Prunus persica
PRUPE_ppa014157mg
N
0.742
Pm002519
Prunus mume
Pm002519
N
0.742
fgenesh1_pm.C_scaffold_5001425
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001425
I
0.727
TCM_022113
Theobroma cacao
TCM_022113
I
0.727
VIT_06s0004g03160
Vitis vinifera
VIT_06s0004g03160
I
0.727
Cla018556
Citrullus lanatus
Cla018556
I
0.727
Cucsa.124240
Cucumis sativus
Cucsa.124240
I
0.727
mgf000337m
Mimulus guttatus
mgf000337m
I
0.727
Ciclev10013218m.g
Citrus clementina
Ciclev10013218m.g
I
0.727
gene09647-v1.0-hybrid
Fragaria vesca
gene09647-v1.0-hybrid
N
0.727
orange1.1g044991m.g
Citrus sinensis
orange1.1g044991m.g
I
0.727
AMTR_s00052p00202630
Amborella trichopoda
AMTR_s00052p00202630
I
0.712
GLYMA03G33640
Glycine max
GLYMA03G33640
I
0.712
PGSC0003DMG400001772
Solanum tuberosum
PGSC0003DMG400001772
I
0.712
Solyc09g007500.2
Solanum lycopersicum
Solyc09g007500.2
I
0.712
Cla018106
Citrullus lanatus
Cla018106
I
0.712
cassava45931.m1
Manihot esculenta
cassava45931.m1
I
0.712
Cucsa.307040
Cucumis sativus
Cucsa.307040
I
0.712
Cagra.0612s0062
Capsella grandiflora
Cagra.0612s0062
I
0.712
Carubv10018341m.g
Capsella rubella
Carubv10018341m.g
I
0.712
evm.TU.supercontig_638.2
Carica papaya
evm.TU.supercontig_638.2
I
0.712
Gorai.002G249300
Gossypium raimondii
Gorai.002G249300
I
0.712
SapurV1A.0112s0080
Salix purpurea
SapurV1A.0112s0080
I
0.712
SapurV1A.0209s0130
Salix purpurea
SapurV1A.0209s0130
I
0.712