CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra004318
(
Brassica rapa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Bra004318
T001008_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra004318.1-P
AP2
108
159
KKPVGVRQRKWGKWAAEIRHPITKNRTWLGTFETEEAAHQAYKDKRKEYDAL
Links
Other
AP2
family TFs
Other
Brassica rapa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo6g106990
Brassica oleracea
Bo6g106990
N
0.811
Bo6g096060
Brassica oleracea
Bo6g096060
N
0.765
Bra004033
Brassica rapa
Bra004033
N
0.765
Thhalv10019722m.g
Eutrema salsugineum
Thhalv10019722m.g
I
0.734
Bostr.0556s0264
Boechera stricta
Bostr.0556s0264
I
0.681
scaffold_500470.1
Arabidopsis lyrata
scaffold_500470.1
I
0.677
Cagra.6197s0021
Capsella grandiflora
Cagra.6197s0021
I
0.677