GRMZM2G132223 (Zea mays)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GRMZM2G132223 T002175_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
DISCONTINUED: This record has been withdrawn by NCBI staff. This record represented a gene that is not currently annotated by NCBI.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK17878.1
M01099_2.00 		Cannabis sativa
CGCCGYCR
YGRCGGCG		 PBM
Lambert et al.(2019)
pTH10133 		0.749 0.894
OS05G0497200
M01636_2.00 		Oryza sativa
CGSCGCCR
YGGCGSCG		 PBM
Weirauch et al.(2014)
pTH8640 		0.739 0.872
ERF3
M01607_2.00 		Arabidopsis thaliana
CGCCGSCR
YGSCGGCG		 PBM
Weirauch et al.(2014)
pTH8109 		0.685 0.745
ERF3
M06584_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
ERF3_col_a 		0.685 0.745
ERF3
M06585_2.00 		Arabidopsis thaliana
NNHHDNHNNYDCCGCCGYCR
YGRCGGCGGHRNNDNHDDNN		 Dap-seq
OMalley et al.(2016)
ERF3_colamp_a 		0.685 0.745
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.679 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.679 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G132223_P01 AP2 27 78

Links

Other AP2 family TFs
Other Zea mays TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si003053m.g Setaria italica Si003053m.g I 0.784
BRADI2G52380 Brachypodium distachyon BRADI2G52380 I 0.784
TRAES3BF075600040CFD_g Triticum aestivum TRAES3BF075600040CFD_g I 0.784
MLOC_66843 Hordeum vulgare MLOC_66843 I 0.779
Pavir.Ea03148 Panicum virgatum Pavir.Ea03148 I 0.771
GRMZM2G002119 Zea mays GRMZM2G002119 I 0.767
GSMUA_Achr6G00240_001 Musa acuminata GSMUA_Achr6G00240_001 I 0.764
GSMUA_Achr6G01440_001 Musa acuminata GSMUA_Achr6G01440_001 I 0.759
Pavir.Eb03165 Panicum virgatum Pavir.Eb03165 I 0.757
Sb03g037085 Sorghum bicolor Sb03g037085 I 0.753
ERF12 Vitis vinifera VIT_10s0003g00130 I 0.749
Ciclev10016982m.g Citrus clementina Ciclev10016982m.g I 0.749
30190.m011323 Ricinus communis 30190.m011323 I 0.749
PGSC0003DMG400029713 Solanum tuberosum PGSC0003DMG400029713 I 0.749
orange1.1g030994m.g Citrus sinensis orange1.1g030994m.g I 0.749
SapurV1A.0012s0570 Salix purpurea SapurV1A.0012s0570 I 0.749
mgf023367m Mimulus guttatus mgf023367m I 0.749
Solyc02g077840.1 Solanum lycopersicum Solyc02g077840.1 I 0.749
PRUPE_ppa022435mg Prunus persica PRUPE_ppa022435mg I 0.749
PRUPE_ppa012385mg Prunus persica PRUPE_ppa012385mg I 0.749
POPTR_0011s05570 Populus trichocarpa POPTR_0011s05570 I 0.749
TCM_029823 Theobroma cacao TCM_029823 I 0.749
SapurV1A.0032s0450 Salix purpurea SapurV1A.0032s0450 I 0.749
POPTR_0004s04700 Populus trichocarpa POPTR_0004s04700 I 0.749
MTR_2g014300 Medicago truncatula MTR_2g014300 I 0.749
cassava4486.m1 Manihot esculenta cassava4486.m1 I 0.749
chr6.CM0114.130.nc Lotus japonicus chr6.CM0114.130.nc I 0.749
Pm010083 Prunus mume Pm010083 I 0.749
PK17878.1 Cannabis sativa PK17878.1 D 0.749
GLYMA13G31010 Glycine max GLYMA13G31010 I 0.749
cassava42971.valid.m1 Manihot esculenta cassava42971.valid.m1 I 0.749
GLYMA03G31640 Glycine max GLYMA03G31640 I 0.749
Gorai.011G029700 Gossypium raimondii Gorai.011G029700 I 0.749
chr1.CM0375.170.nd Lotus japonicus chr1.CM0375.170.nd I 0.749
Ca_00326 Cicer arietinum Ca_00326 I 0.749
Pm020210 Prunus mume Pm020210 I 0.749
evm.TU.supercontig_27.18 Carica papaya evm.TU.supercontig_27.18 I 0.749
GLYMA15G08360 Glycine max GLYMA15G08360 I 0.749
Aquca_036_00073 Aquilegia coerulea Aquca_036_00073 I 0.747
POPTR_0002s04430 Populus trichocarpa POPTR_0002s04430 I 0.747
Aquca_017_00628 Aquilegia coerulea Aquca_017_00628 I 0.746
Cla020002 Citrullus lanatus Cla020002 I 0.746
Cucsa.126860 Cucumis sativus Cucsa.126860 I 0.746
SELMODRAFT_49950 Selaginella moellendorffii SELMODRAFT_49950 I 0.744
SELMODRAFT_73142 Selaginella moellendorffii SELMODRAFT_73142 I 0.744
gene29735-v1.0-hybrid Fragaria vesca gene29735-v1.0-hybrid I 0.743
GSMUA_Achr3G29290_001 Musa acuminata GSMUA_Achr3G29290_001 I 0.741
GSMUA_Achr5G09940_001 Musa acuminata GSMUA_Achr5G09940_001 I 0.740
GSMUA_Achr4G06660_001 Musa acuminata GSMUA_Achr4G06660_001 I 0.740
OMERI05G19480 Oryza meridionalis OMERI05G19480 I 0.739
ONIVA05G22260 Oryza nivara ONIVA05G22260 I 0.739
LPERR05G17470 Leersia perrieri LPERR05G17470 I 0.739
OPUNC05G19220 Oryza punctata OPUNC05G19220 I 0.739
OGLUM05G22780 Oryza glumaepatula OGLUM05G22780 I 0.739
BGIOSGA017797 Oryza indica BGIOSGA017797 I 0.739
ORUFI05G22840 Oryza rufipogon ORUFI05G22840 I 0.739
OS05G0497200 Oryza sativa OS05G0497200 D 0.739
ORGLA05G0187500 Oryza glaberrima ORGLA05G0187500 I 0.739
Ca_12205 Cicer arietinum Ca_12205 I 0.738
e_gw1.124.59.1 Physcomitrella patens e_gw1.124.59.1 I 0.737
VIT_14s0081g00520 Vitis vinifera VIT_14s0081g00520 I 0.737
VIT_07s0141g00690 Vitis vinifera VIT_07s0141g00690 I 0.736
Cagra.1822s0023 Capsella grandiflora Cagra.1822s0023 I 0.736
Bra010881 Brassica rapa Bra010881 I 0.736
Bra030094 Brassica rapa Bra030094 I 0.736
Bra032898 Brassica rapa Bra032898 I 0.736
Bo7g048190 Brassica oleracea Bo7g048190 I 0.736
Bo5g055840 Brassica oleracea Bo5g055840 I 0.736
ERF12 Arabidopsis thaliana AT1G28360 I 0.736
Bo3g143340 Brassica oleracea Bo3g143340 I 0.736
ERF12 Arabidopsis lyrata fgenesh2_kg.1__3004__AT1G28360.1 I 0.736
Carubv10011585m.g Capsella rubella Carubv10011585m.g I 0.736
Bostr.15697s0156 Boechera stricta Bostr.15697s0156 I 0.736
estExt_gwp_gw1.C_1270048 Physcomitrella patens estExt_gwp_gw1.C_1270048 I 0.736
Thhalv10009947m.g Eutrema salsugineum Thhalv10009947m.g I 0.736
PK02998.1 Cannabis sativa PK02998.1 I 0.736
SELMODRAFT_443461 Selaginella moellendorffii SELMODRAFT_443461 I 0.735
POPTR_0005s24110 Populus trichocarpa POPTR_0005s24110 I 0.735
AMTR_s00002p00264660 Amborella trichopoda AMTR_s00002p00264660 I 0.735
SELMODRAFT_430375 Selaginella moellendorffii SELMODRAFT_430375 I 0.731
gene21403-v1.0-hybrid Fragaria vesca gene21403-v1.0-hybrid I 0.725
SELMODRAFT_59974 Selaginella moellendorffii SELMODRAFT_59974 I 0.719
MDP0000310904 Malus domestica MDP0000310904 I 0.717
MDP0000236605 Malus domestica MDP0000236605 I 0.717
Cucsa.139820 Cucumis sativus Cucsa.139820 I 0.716
MDP0000457509 Malus domestica MDP0000457509 I 0.716
GSMUA_Achr8G15820_001 Musa acuminata GSMUA_Achr8G15820_001 I 0.714
GSMUA_AchrUn_randomG06910_001 Musa acuminata GSMUA_AchrUn_randomG06910_001 I 0.712
gw1.90.191.1 Physcomitrella patens gw1.90.191.1 I 0.712
VIT_19s0090g01080 Vitis vinifera VIT_19s0090g01080 I 0.708
Cla013723 Citrullus lanatus Cla013723 I 0.706
TCM_030804 Theobroma cacao TCM_030804 I 0.700
Gorai.002G092900 Gossypium raimondii Gorai.002G092900 I 0.698
e_gw1.487.2.1 Physcomitrella patens e_gw1.487.2.1 I 0.696
GRMZM2G066158 Zea mays GRMZM2G066158 I 0.695
SapurV1A.0118s0170 Salix purpurea SapurV1A.0118s0170 I 0.694
SELMODRAFT_19889 Selaginella moellendorffii SELMODRAFT_19889 I 0.694
ERF3 Arabidopsis lyrata fgenesh2_kg.1__4150__AT1G50640.1 I 0.693
Bostr.26675s0113 Boechera stricta Bostr.26675s0113 I 0.693
Carubv10010284m.g Capsella rubella Carubv10010284m.g I 0.687
Cagra.0952s0001 Capsella grandiflora Cagra.0952s0001 I 0.687
Thhalv10011689m.g Eutrema salsugineum Thhalv10011689m.g I 0.687
SELMODRAFT_72880 Selaginella moellendorffii SELMODRAFT_72880 I 0.686
SELMODRAFT_73144 Selaginella moellendorffii SELMODRAFT_73144 I 0.686
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.686
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.686
ERF3 Arabidopsis thaliana AT1G50640 D 0.685
Gorai.009G443400 Gossypium raimondii Gorai.009G443400 I 0.685
POPTR_0007s01110 Populus trichocarpa POPTR_0007s01110 I 0.685
Lus10039857.g Linum usitatissimum Lus10039857.g I 0.682
29983.m003147 Ricinus communis 29983.m003147 I 0.681
Pavir.J36215 Panicum virgatum Pavir.J36215 I 0.680
Si024479m.g Setaria italica Si024479m.g I 0.680
POPTR_0001s36610 Populus trichocarpa POPTR_0001s36610 I 0.680
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I 0.679
PRUPE_ppa010090mg Prunus persica PRUPE_ppa010090mg I 0.679
Bra015266 Brassica rapa Bra015266 I 0.679
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I 0.679
ERF9 Arabidopsis thaliana AT5G44210 D 0.679
PGSC0003DMG400022823 Solanum tuberosum PGSC0003DMG400022823 I 0.677
PGSC0003DMG400013744 Solanum tuberosum PGSC0003DMG400013744 I 0.677
POPTR_0017s04540 Populus trichocarpa POPTR_0017s04540 I 0.677
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I 0.677
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.677
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I 0.677
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I 0.677
evm.TU.supercontig_83.80 Carica papaya evm.TU.supercontig_83.80 I 0.677
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.677