Solyc10g083560.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc10g083560.1 T005531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.690 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc10g083560.1.1 AP2 20 72

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.817
Solyc09g009240.1 Solanum lycopersicum Solyc09g009240.1 N 0.739
mgf018102m Mimulus guttatus mgf018102m N 0.737
mgf019185m Mimulus guttatus mgf019185m N 0.731
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.708
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.705
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.703
HRD Arabidopsis lyrata scaffold_402264.1 I 0.698
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.698
Bo4g034600 Brassica oleracea Bo4g034600 I 0.696
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.696
ERF024 Arabidopsis thaliana AT2G36450 D 0.690
TCM_022462 Theobroma cacao TCM_022462 N 0.688
Pm026227 Prunus mume Pm026227 N 0.684
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.680
Cla017994 Citrullus lanatus Cla017994 N 0.679
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.679