cassava32861.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava32861.m1 T006886_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32861.m1 AP2 105 156

Links

Other AP2 family TFs
Other Manihot esculenta TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.777
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.767
Gorai.002G159400 Gossypium raimondii Gorai.002G159400 N 0.765
Pm026227 Prunus mume Pm026227 N 0.759
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.755
Eucgr.K02071 Eucalyptus grandis Eucgr.K02071 N 0.747
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.742
TCM_022462 Theobroma cacao TCM_022462 N 0.737
29092.m000462 Ricinus communis 29092.m000462 N 0.731
HRD Vitis vinifera VIT_08s0007g03810 N 0.726
Gorai.009G407200 Gossypium raimondii Gorai.009G407200 N 0.724
orange1.1g039696m.g Citrus sinensis orange1.1g039696m.g N 0.722
Ciclev10012757m.g Citrus clementina Ciclev10012757m.g N 0.722
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.717
Cla017994 Citrullus lanatus Cla017994 N 0.717
Cla018653 Citrullus lanatus Cla018653 N 0.716
Lus10023873.g Linum usitatissimum Lus10023873.g N 0.712
Lus10014376.g Linum usitatissimum Lus10014376.g N 0.712
MDP0000195376 Malus domestica MDP0000195376 N 0.707
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.705
POPTR_0006s02180 Populus trichocarpa POPTR_0006s02180 N 0.705
LjSGA_035548.1 Lotus japonicus LjSGA_035548.1 N 0.704
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.703
GLYMA03G34970 Glycine max GLYMA03G34970 N 0.700
GLYMA15G02900 Glycine max GLYMA15G02900 N 0.700
GLYMA19G37670 Glycine max GLYMA19G37670 N 0.700
Gorai.002G241800 Gossypium raimondii Gorai.002G241800 N 0.700
SapurV1A.0154s0220 Salix purpurea SapurV1A.0154s0220 N 0.696
POPTR_0016s02010 Populus trichocarpa POPTR_0016s02010 N 0.692
SapurV1A.0767s0130 Salix purpurea SapurV1A.0767s0130 N 0.681
Ca_00768 Cicer arietinum Ca_00768 N 0.681