CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29092.m000462
(
Ricinus communis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
29092.m000462
T006692_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29092.m000462
AP2
20
71
PVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGR
Links
Other
AP2
family TFs
Other
Ricinus communis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HRD
Vitis vinifera
VIT_08s0007g03810
N
0.762
Lus10023873.g
Linum usitatissimum
Lus10023873.g
N
0.747
Lus10014376.g
Linum usitatissimum
Lus10014376.g
N
0.747
MDP0000195376
Malus domestica
MDP0000195376
N
0.743
POPTR_0006s02180
Populus trichocarpa
POPTR_0006s02180
N
0.740
LjSGA_035548.1
Lotus japonicus
LjSGA_035548.1
N
0.739
GLYMA19G37670
Glycine max
GLYMA19G37670
N
0.735
GLYMA03G34970
Glycine max
GLYMA03G34970
N
0.735
GLYMA15G02900
Glycine max
GLYMA15G02900
N
0.735
SapurV1A.0154s0220
Salix purpurea
SapurV1A.0154s0220
N
0.731
cassava32861.m1
Manihot esculenta
cassava32861.m1
N
0.731
evm.TU.supercontig_5.71
Carica papaya
evm.TU.supercontig_5.71
N
0.729
POPTR_0016s02010
Populus trichocarpa
POPTR_0016s02010
N
0.728
cassava21723.m1
Manihot esculenta
cassava21723.m1
N
0.720
Gorai.002G159400
Gossypium raimondii
Gorai.002G159400
N
0.717
Ca_00768
Cicer arietinum
Ca_00768
N
0.716
Pm026227
Prunus mume
Pm026227
N
0.712
MDP0000833641
Malus domestica
MDP0000833641
N
0.711
PRUPE_ppa020711mg
Prunus persica
PRUPE_ppa020711mg
N
0.707
GLYMA10G07740
Glycine max
GLYMA10G07740
N
0.705
Aquca_027_00393
Aquilegia coerulea
Aquca_027_00393
N
0.704
GLYMA13G21560
Glycine max
GLYMA13G21560
N
0.702
Eucgr.K02071
Eucalyptus grandis
Eucgr.K02071
N
0.700
gene30159-v1.0-hybrid
Fragaria vesca
gene30159-v1.0-hybrid
N
0.696
Cucsa.083150
Cucumis sativus
Cucsa.083150
N
0.695
TCM_022462
Theobroma cacao
TCM_022462
N
0.689
Gorai.009G407200
Gossypium raimondii
Gorai.009G407200
N
0.677