Cucsa.302750 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.302750 T007086_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.789 0.840
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.789 0.840
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.764 0.840
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.764 0.840
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.764 0.840
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.742 0.820
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.742 0.820
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.742 0.820
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.742 0.820
DREB1F
M00962_2.00
Arabidopsis thaliana
NRCCGACNN

NNGTCGGYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana
0.714 0.760
DREB1F
M00840_2.00
Arabidopsis thaliana
NRYCGACNN

NNGTCGRYN
PBM
Franco-Zorrilla et al.(2014)
DDF1
0.714 0.760
DDF1
M00964_2.00
Arabidopsis lyrata
NRYCGACDY

RHGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata
0.714 0.760
DREB1F
M06564_2.00
Arabidopsis thaliana
NHNHYGYCGACATNN

NNATGTCGRCRDNDN
Dap-seq
OMalley et al.(2016)
DDF1_col_a
0.714 0.760
DREB1F
M06565_2.00
Arabidopsis thaliana
HNDNNRYCGACAH

DTGTCGRYNNHND
Dap-seq
OMalley et al.(2016)
DDF1_colamp_a
0.714 0.760
DREB1F
M09701_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1F_03
0.714 0.760
DREB1G
M01635_2.00
Oryza sativa
NYGCCGACAN

NTGTCGGCRN
PBM
Weirauch et al.(2014)
pTH8352
0.688 0.720
DREB1G
M09707_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1G_01
0.688 0.720
ddf2
M00965_2.00
Arabidopsis lyrata
NRYCGACAT

ATGTCGRYN
PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata
0.686 0.720
DREB1B
M06643_2.00
Arabidopsis thaliana
DHBRCCGACRHN

NDYGTCGGYVDH
Dap-seq
OMalley et al.(2016)
CBF1_col_a
0.679 0.820
DREB1B
M06644_2.00
Arabidopsis thaliana
NNNHBRCCGACAWNN

NNWTGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF1_colamp_a
0.679 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.302750.1 AP2 49 100

Links

Other AP2 family TFs
Other Cucumis sativus TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30147.m014313 Ricinus communis 30147.m014313 I 0.737
30190.m011119 Ricinus communis 30190.m011119 I 0.724
30190.m011120 Ricinus communis 30190.m011120 I 0.809
60638.m00016 Ricinus communis 60638.m00016 I 0.728
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.696
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.761
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.747
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.770
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.780
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.729
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.717
DREB1F Arabidopsis thaliana AT1G12610 D 0.714
DREB1C Arabidopsis thaliana AT4G25470 D 0.764
DREB1A Arabidopsis thaliana AT4G25480 D 0.742
DREB1B Arabidopsis thaliana AT4G25490 D 0.679
DREB1D Arabidopsis thaliana AT5G51990 D 0.789
DREB1G Oryza indica BGIOSGA008804 I 0.688
Bo01335s010 Brassica oleracea Bo01335s010 I 0.718
Bo8g108050 Brassica oleracea Bo8g108050 I 0.711
Bo9g104770 Brassica oleracea Bo9g104770 I 0.789
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.704
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.789
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.686
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.728
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.754
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.728
Bra016763 Brassica rapa Bra016763 I 0.718
Bra026963 Brassica rapa Bra026963 I 0.711
Bra027612 Brassica rapa Bra027612 I 0.678
Bra028290 Brassica rapa Bra028290 I 0.789
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.693
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.789
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.707
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.757
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.728
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.728
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.710
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.707
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.789
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.702
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.792
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.763
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.766
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.732
Ca_04504 Cicer arietinum Ca_04504 I 0.690
Ca_08732 Cicer arietinum Ca_08732 I 0.722
Ca_18948 Cicer arietinum Ca_18948 I 0.703
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.698
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.698
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.697
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.773
Cla002362 Citrullus lanatus Cla002362 I 0.791
Cla006315 Citrullus lanatus Cla006315 I 0.753
Cla011674 Citrullus lanatus Cla011674 I 0.818
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.740
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.755
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.704
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.682
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.677
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.681
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.682
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.682
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.682
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.808
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.767
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.683
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.771
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.714
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.686
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.736
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.765
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.815
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.682
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.710
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.778
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.704
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.732
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.732
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.784
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.769
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.679
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.720
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.697
Gorai.003G162700 Gossypium raimondii Gorai.003G162700 I 0.695
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.711
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.763
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.811
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.688
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.756
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.726
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.758
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.686
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.688
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.751
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.751
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.751
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.726
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.720
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.751
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.751
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.726
MDP0000154764 Malus domestica MDP0000154764 I 0.800
MDP0000198054 Malus domestica MDP0000198054 I 0.794
mgf016974m Mimulus guttatus mgf016974m I 0.690
mgf017136m Mimulus guttatus mgf017136m I 0.752
mgf018631m Mimulus guttatus mgf018631m I 0.690
mgf018934m Mimulus guttatus mgf018934m I 0.690
mgf019061m Mimulus guttatus mgf019061m I 0.740
mgf022408m Mimulus guttatus mgf022408m I 0.690
mgf026339m Mimulus guttatus mgf026339m I 0.715
mgf026642m Mimulus guttatus mgf026642m I 0.771
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.693
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.705
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.747
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.707
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.677
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.724
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.677
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.717
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.717
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.727
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.736
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.751
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.725
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.747
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.724
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.747
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.754
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.707
OBART02G27760 Oryza barthii OBART02G27760 I 0.688
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.688
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.688
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.688
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.688
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.766
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.697
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.796
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.688
DREB1G Oryza sativa OS02G0677300 D 0.688
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.688
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.688
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.779
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.733
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.764
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.695
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.751
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.748
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.758
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.688
PK23332.1 Cannabis sativa PK23332.1 I 0.765
Pm023769 Prunus mume Pm023769 I 0.788
Pm023772 Prunus mume Pm023772 I 0.773
Pm023775 Prunus mume Pm023775 I 0.803
Pm023777 Prunus mume Pm023777 N 0.699
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.766
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.759
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.719
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.719
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.763
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.757
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.803
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.781
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.752
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.707
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.749
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.788
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.745
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.742
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.719
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.759
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.745
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.741
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.688
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.789
Si018262m.g Setaria italica Si018262m.g I 0.678
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.700
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.765
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.763
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.760
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.738
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.704
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.692
TCM_016175 Theobroma cacao TCM_016175 I 0.767
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.717
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.789
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.686
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.754
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.750
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.682
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.715
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.697
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.728