CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_129.70
(
Carica papaya
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
evm.TU.supercontig_129.70
T008263_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_129.70
AP2
81
138
SQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDLEEKAARAYDLAALKYWGP
Links
Other
AP2
family TFs
Other
Carica papaya
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB03G42600
Oryza brachyantha
OB03G42600
N
0.907
Lus10039650.g
Linum usitatissimum
Lus10039650.g
N
0.896
Lus10011730.g
Linum usitatissimum
Lus10011730.g
N
0.896
GRMZM2G146688
Zea mays
GRMZM2G146688
N
0.843
30170.m013669
Ricinus communis
30170.m013669
N
0.843
Cucsa.353040
Cucumis sativus
Cucsa.353040
I
0.835
OB06G31060
Oryza brachyantha
OB06G31060
N
0.821
OBART06G23380
Oryza barthii
OBART06G23380
N
0.821
OMERI06G23370
Oryza meridionalis
OMERI06G23370
N
0.821
BGIOSGA023402
Oryza indica
BGIOSGA023402
N
0.821
OLONG_002212
Oryza longistaminata
OLONG_002212
N
0.821
BBM
Vitis vinifera
VIT_04s0023g00950
N
0.813
evm.TU.supercontig_99.39
Carica papaya
evm.TU.supercontig_99.39
N
0.813
PK15670.1
Cannabis sativa
PK15670.1
N
0.788
PDK_20s1310831g004
Phoenix dactylifera
PDK_20s1310831g004
N
0.761
BRADI3G59300
Brachypodium distachyon
BRADI3G59300
N
0.733
Cla022214
Citrullus lanatus
Cla022214
N
0.717
MDP0000803527
Malus domestica
MDP0000803527
N
0.716
mgf017600m
Mimulus guttatus
mgf017600m
N
0.712
Eucgr.A02341
Eucalyptus grandis
Eucgr.A02341
N
0.710
chr3.CM0452.130.nd
Lotus japonicus
chr3.CM0452.130.nd
N
0.708
LjSGA_012098.1
Lotus japonicus
LjSGA_012098.1
N
0.707
PK18855.1
Cannabis sativa
PK18855.1
N
0.703
AMTR_s00159p00062070
Amborella trichopoda
AMTR_s00159p00062070
N
0.703
mgf019897m
Mimulus guttatus
mgf019897m
N
0.703
Cucsa.338170
Cucumis sativus
Cucsa.338170
N
0.701
Aquca_009_00241
Aquilegia coerulea
Aquca_009_00241
N
0.701
cassava19560.m1
Manihot esculenta
cassava19560.m1
N
0.700
gene02470-v1.0-hybrid
Fragaria vesca
gene02470-v1.0-hybrid
N
0.699
cassava421.valid.m1
Manihot esculenta
cassava421.valid.m1
N
0.699
Carubv10023272m.g
Capsella rubella
Carubv10023272m.g
N
0.699
Bostr.11568s0008
Boechera stricta
Bostr.11568s0008
N
0.699
PRUPE_ppa006202mg
Prunus persica
PRUPE_ppa006202mg
N
0.699
30006.m000282
Ricinus communis
30006.m000282
N
0.699
VIT_08s0007g08580
Vitis vinifera
VIT_08s0007g08580
N
0.699
Lus10040140.g
Linum usitatissimum
Lus10040140.g
N
0.699
MDP0000314518
Malus domestica
MDP0000314518
N
0.699
SapurV1A.0037s0030
Salix purpurea
SapurV1A.0037s0030
N
0.699
Bo3g035770
Brassica oleracea
Bo3g035770
N
0.699
Lus10000965.g
Linum usitatissimum
Lus10000965.g
N
0.699
MTR_7g091390
Medicago truncatula
MTR_7g091390
N
0.699
POPTR_0006s04820
Populus trichocarpa
POPTR_0006s04820
N
0.699
POPTR_0016s05670
Populus trichocarpa
POPTR_0016s05670
N
0.699
Bra004641
Brassica rapa
Bra004641
N
0.698
fgenesh2_kg.4__2311__AT2G41710.2
Arabidopsis lyrata
fgenesh2_kg.4__2311__AT2G41710.2
N
0.698
Bo4g013420
Brassica oleracea
Bo4g013420
N
0.698
Cagra.0914s0005
Capsella grandiflora
Cagra.0914s0005
N
0.698
Ciclev10005012m.g
Citrus clementina
Ciclev10005012m.g
N
0.698
GLYMA03G29240
Glycine max
GLYMA03G29240
N
0.698
AT2G41710
Arabidopsis thaliana
AT2G41710
N
0.698
PK12273.1
Cannabis sativa
PK12273.1
N
0.698
TCM_024554
Theobroma cacao
TCM_024554
N
0.698
orange1.1g018292m.g
Citrus sinensis
orange1.1g018292m.g
N
0.698
Ca_07237
Cicer arietinum
Ca_07237
N
0.698
SapurV1A.3066s0020
Salix purpurea
SapurV1A.3066s0020
N
0.698
Gorai.003G091500
Gossypium raimondii
Gorai.003G091500
N
0.698
evm.TU.supercontig_224.4
Carica papaya
evm.TU.supercontig_224.4
N
0.698
Thhalv10016812m.g
Eutrema salsugineum
Thhalv10016812m.g
N
0.698
GLYMA19G31960
Glycine max
GLYMA19G31960
N
0.698
TRIUR3_07433
Triticum urartu
TRIUR3_07433
N
0.691
OGLUM05G15890
Oryza glumaepatula
OGLUM05G15890
N
0.691
OLONG_020459
Oryza longistaminata
OLONG_020459
N
0.691
F775_10869
Aegilops tauschii
F775_10869
N
0.691
OBART05G15060
Oryza barthii
OBART05G15060
N
0.691
GRMZM2G013657
Zea mays
GRMZM2G013657
N
0.691
OB05G22940
Oryza brachyantha
OB05G22940
N
0.691
LPERR05G11930
Leersia perrieri
LPERR05G11930
N
0.691
OMERI05G13370
Oryza meridionalis
OMERI05G13370
N
0.691
ORUFI05G16140
Oryza rufipogon
ORUFI05G16140
N
0.691
Sb09g019190
Sorghum bicolor
Sb09g019190
N
0.691
ONIVA05G15390
Oryza nivara
ONIVA05G15390
N
0.691
BRADI2G26987
Brachypodium distachyon
BRADI2G26987
N
0.691
OPUNC05G13110
Oryza punctata
OPUNC05G13110
N
0.691
BGIOSGA019793
Oryza indica
BGIOSGA019793
N
0.691
GLYMA02G33090
Glycine max
GLYMA02G33090
N
0.690
Pavir.Ca01410
Panicum virgatum
Pavir.Ca01410
N
0.689
ORGLA05G0129100
Oryza glaberrima
ORGLA05G0129100
N
0.689
MLOC_7325
Hordeum vulgare
MLOC_7325
N
0.689
Pavir.Cb01456
Panicum virgatum
Pavir.Cb01456
N
0.689
Si021952m.g
Setaria italica
Si021952m.g
N
0.689
Traes_6AS_53FA034C9
Triticum aestivum
Traes_6AS_53FA034C9
N
0.680