NCAS_0A04710 (Naumovozyma castellii)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 NCAS_0A04710 T012133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHD1
M00006_2.00 		Saccharomyces cerevisiae
GMTGCAKG
CMTGCAKC		 PBM
Badis et al.(2008)
PHD1_4559 		0.755 0.747
PHD1
M01516_2.00 		Saccharomyces cerevisiae
NBMTGCANN
NNTGCAKVN		 PBM
Zhu et al.(2009)
Phd1 		0.755 0.747
PHD1
M07437_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1 		0.755 0.747
PHD1
M07547_2.00 		Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH
DGBGKNNGKGTGTGGKGTGTGGGTGTGB		 ChIP-exo
Rhee et al.(2011)
Phd1_1 		0.755 0.747
PHD1
M07548_2.00 		Saccharomyces cerevisiae
MYGCRC
GYGCRK		 ChIP-exo
Rhee et al.(2011)
Phd1_2 		0.755 0.747
PHD1
M07549_2.00 		Saccharomyces cerevisiae
TAGCCGCCGAR
YTCGGCGGCTA		 ChIP-exo
Rhee et al.(2011)
Phd1_3 		0.755 0.747
PHD1
M08475_2.00 		Saccharomyces cerevisiae
SCNGCRGG
CCYGCNGS		 Misc
DeBoer et al.(2011)
YKL043W_393 		0.755 0.747
PHD1
M08476_2.00 		Saccharomyces cerevisiae
NSMTGCABNN
NNVTGCAKSN		 Misc
DeBoer et al.(2011)
YKL043W_554 		0.755 0.747
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC67029 APSES 224 314

Links

Other APSES family TFs
Other Naumovozyma castellii TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.880
PHD1 Saccharomyces cerevisiae YKL043W D 0.755
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.744
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.736
SU7_2011 Saccharomyces arboricola SU7_2011 I 0.717
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.708
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.702
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.696
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.690
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.690
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.683
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.673
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.669
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.665
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.661
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.659
PGUG_03651 Meyerozyma guilliermondii PGUG_03651 I 0.659
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.659
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.659
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.659
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.657
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.655
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.655
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.652
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.651
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.651
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.651