PGSC0003DMG401018896 (Solanum tuberosum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 PGSC0003DMG401018896 T015427_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400048638 ARID/BRIGHT 40 121

Links

Other ARID/BRIGHT family TFs
Other Solanum tuberosum TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GD20218 Drosophila simulans FBgn0191696 N 0.582
ACOM023832 Anopheles coluzzii ACOM023832 N 0.582
Bra015737 Brassica rapa Bra015737 N 0.554
GL12242 Drosophila persimilis FBgn0149849 N 0.545
MESCA003685 Megaselia scalaris MESCA003685 N 0.545
Solyc12g038740.1 Solanum lycopersicum Solyc12g038740.1 N 0.531
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.531
HHAL003716-PA Halyomorpha halys HHAL003716-PA N 0.521
ACRE_008210 Acremonium chrysogenum ACRE_008210 N 0.512
GG.C169_S05_00378 Chlorella vulgaris GG.C169_S05_00378 N 0.501
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N 0.501
orange1.1g009744m.g Citrus sinensis orange1.1g009744m.g I 0.500
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.499
SVUK_0000804601 Strongylus vulgaris SVUK_0000804601 N 0.493
NV31651 Nasonia vitripennis NV31651 N 0.491
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N 0.488
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N 0.488
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.488
TRIUR3_29596 Triticum urartu TRIUR3_29596 N 0.487
evm.TU.supercontig_70.18 Carica papaya evm.TU.supercontig_70.18 N 0.487
Traes_2AS_40ED2C7BC Triticum aestivum Traes_2AS_40ED2C7BC N 0.487
ORGLA07G0233500 Oryza glaberrima ORGLA07G0233500 N 0.487
PDK_20s1315202g001 Phoenix dactylifera PDK_20s1315202g001 N 0.487
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.487
PGSC0003DMG400047019 Solanum tuberosum PGSC0003DMG400047019 N 0.487
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N 0.487
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.487
CapteG108943 Capitella teleta CapteG108943 N 0.485
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N 0.482
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N 0.482
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N 0.482
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.474
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.474
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N 0.474
BOTBODRAFT_44712 Botryobasidium botryosum BOTBODRAFT_44712 N 0.461
Myotis_brandtii_ARID2_10029491 Myotis brandtii Myotis_brandtii_ARID2_10029491 N 0.460
HCOI00647600 Haemonchus contortus HCOI00647600 N 0.456
Bo4g012540 Brassica oleracea Bo4g012540 N 0.451
cassava33852.m1 Manihot esculenta cassava33852.m1 N 0.447
cassava32082.m1 Manihot esculenta cassava32082.m1 N 0.447
SPER_0000445801 Spirometra erinaceieuropaei SPER_0000445801 N 0.447
e_gw1.8.356.1 Monosiga brevicollis e_gw1.8.356.1 N 0.445
PHUM027610 Pediculus humanus PHUM027610 N 0.444
Myotis_brandtii_Arid3c_10010321 Myotis brandtii Myotis_brandtii_Arid3c_10010321 N 0.442
Lus10008531.g Linum usitatissimum Lus10008531.g N 0.442
MCINX010724 Melitaea cinxia MCINX010724 N 0.442
Gfo_R015467 Geospiza fortis Gfo_R015467 N 0.435
Myotis_brandtii_KDM5D_10002268 Myotis brandtii Myotis_brandtii_KDM5D_10002268 N 0.433
ASIM_0001975501 Anisakis simplex ASIM_0001975501 N 0.433
OS06G0622300 Oryza sativa OS06G0622300 I 0.433
F775_31416 Aegilops tauschii F775_31416 N 0.433
F775_22367 Aegilops tauschii F775_22367 N 0.433
SPU_009801 Strongylocentrotus purpuratus SPU_009801 N 0.433
SapurV1A.2929s0030 Salix purpurea SapurV1A.2929s0030 N 0.433
SapurV1A.0216s0430 Salix purpurea SapurV1A.0216s0430 N 0.433
SMTD_0001549501 Schistosoma mattheei SMTD_0001549501 N 0.429
TRE_0000846701 Trichobilharzia regenti TRE_0000846701 N 0.429
PHACADRAFT_251691 Phanerochaete carnosa PHACADRAFT_251691 N 0.426
GK21672 Drosophila willistoni FBgn0223657 N 0.426