CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc08g081000.2
(
Solanum lycopersicum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
Solyc08g081000.2
T015638_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc08g081000.2.1
ARID/BRIGHT
100
188
DPKTFELEYNRFLEEHCGKKAKKRIVFEGEDLDLCKLYNFVKRFGGYDKVVKEKKWGEVFRFVRPAGKISECAKHVLFQLYLEHLYDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Solanum lycopersicum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_016246
Theobroma cacao
TCM_016246
N
0.684
Eucgr.D01851
Eucalyptus grandis
Eucgr.D01851
N
0.668
Gorai.004G211700
Gossypium raimondii
Gorai.004G211700
N
0.662
PK05702.1
Cannabis sativa
PK05702.1
N
0.655
chr2.CM0304.950.nc
Lotus japonicus
chr2.CM0304.950.nc
N
0.653
Aquca_038_00045
Aquilegia coerulea
Aquca_038_00045
N
0.648
MTR_5g010300
Medicago truncatula
MTR_5g010300
N
0.638
GLYMA01G42890
Glycine max
GLYMA01G42890
N
0.631
Bo9g029100
Brassica oleracea
Bo9g029100
N
0.617
Cagra.2104s0024
Capsella grandiflora
Cagra.2104s0024
N
0.617
Cla011637
Citrullus lanatus
Cla011637
N
0.615
orange1.1g000212m.g
Citrus sinensis
orange1.1g000212m.g
N
0.614
AT1G63490
Arabidopsis thaliana
AT1G63490
N
0.611
scaffold_200168.1
Arabidopsis lyrata
scaffold_200168.1
N
0.611
30190.m011218
Ricinus communis
30190.m011218
N
0.609
GLYMA11G02580
Glycine max
GLYMA11G02580
N
0.609
cassava14944.m1
Manihot esculenta
cassava14944.m1
N
0.601
Pm023825
Prunus mume
Pm023825
N
0.584
MDP0000286412
Malus domestica
MDP0000286412
N
0.583
MDP0000158904
Malus domestica
MDP0000158904
N
0.583
MDP0000162827
Malus domestica
MDP0000162827
N
0.583
mgf018831m
Mimulus guttatus
mgf018831m
N
0.581
gene32474-v1.0-hybrid
Fragaria vesca
gene32474-v1.0-hybrid
N
0.573
Thhalv10023217m.g
Eutrema salsugineum
Thhalv10023217m.g
N
0.572
MDP0000287313
Malus domestica
MDP0000287313
N
0.552
Lus10008495.g
Linum usitatissimum
Lus10008495.g
N
0.544
AMTR_s00009p00253500
Amborella trichopoda
AMTR_s00009p00253500
N
0.503
Bostr.9600s0015
Boechera stricta
Bostr.9600s0015
N
0.488
PDK_20s1401711g002
Phoenix dactylifera
PDK_20s1401711g002
N
0.475
GRMZM2G466292
Zea mays
GRMZM2G466292
N
0.468
Sb10g031260
Sorghum bicolor
Sb10g031260
N
0.468
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
0.460
chr1.CM0121.100.nd
Lotus japonicus
chr1.CM0121.100.nd
N
0.448
chr1.CM0121.260.nc
Lotus japonicus
chr1.CM0121.260.nc
N
0.448
Cla007529
Citrullus lanatus
Cla007529
I
0.425