orange1.1g000212m.g (Citrus sinensis)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 orange1.1g000212m.g T016153_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g000212m ARID/BRIGHT 99 187
orange1.1g000213m ARID/BRIGHT 99 187
orange1.1g000215m ARID/BRIGHT 99 187

Links

Other ARID/BRIGHT family TFs
Other Citrus sinensis TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.709
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.687
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.687
TCM_016246 Theobroma cacao TCM_016246 N 0.687
30190.m011218 Ricinus communis 30190.m011218 N 0.671
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.663
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.648
Cla011637 Citrullus lanatus Cla011637 N 0.645
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.643
MDP0000287313 Malus domestica MDP0000287313 N 0.630
PK05702.1 Cannabis sativa PK05702.1 N 0.622
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.614
Pm023825 Prunus mume Pm023825 N 0.614
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.614
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.614
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.608
Bo9g029100 Brassica oleracea Bo9g029100 N 0.608
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.592
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.592
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.590
MDP0000286412 Malus domestica MDP0000286412 N 0.585
MDP0000162827 Malus domestica MDP0000162827 N 0.585
MDP0000158904 Malus domestica MDP0000158904 N 0.585
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.550
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.515
mgf018831m Mimulus guttatus mgf018831m N 0.499
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.497
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.497
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.494
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.465
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.465
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.457
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.438
Cla007529 Citrullus lanatus Cla007529 I 0.427