TCM_016246 (Theobroma cacao)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 TCM_016246 T015685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY24718 ARID/BRIGHT 97 185
EOY24719 ARID/BRIGHT 97 185
EOY24720 ARID/BRIGHT 97 185

Links

Other ARID/BRIGHT family TFs
Other Theobroma cacao TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.763
PK05702.1 Cannabis sativa PK05702.1 N 0.720
Cla011637 Citrullus lanatus Cla011637 N 0.716
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.704
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.687
Pm023825 Prunus mume Pm023825 N 0.685
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.684
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.684
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.684
MDP0000162827 Malus domestica MDP0000162827 N 0.683
MDP0000286412 Malus domestica MDP0000286412 N 0.683
MDP0000158904 Malus domestica MDP0000158904 N 0.683
30190.m011218 Ricinus communis 30190.m011218 N 0.682
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.682
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.674
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.653
MDP0000287313 Malus domestica MDP0000287313 N 0.652
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.639
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.638
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.626
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.624
Bo9g029100 Brassica oleracea Bo9g029100 N 0.603
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.603
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.568
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.560
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.558
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.541
mgf018831m Mimulus guttatus mgf018831m N 0.532
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.530
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.463
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.463
Cla007529 Citrullus lanatus Cla007529 I 0.460
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.455
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.449
chr1.CM0121.260.nc Lotus japonicus chr1.CM0121.260.nc N 0.440
chr1.CM0121.100.nd Lotus japonicus chr1.CM0121.100.nd N 0.440