VIT_16s0050g02440 (Vitis vinifera)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 VIT_16s0050g02440 T027889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_16s0050g02440.t01 BED ZF 59 102

Links

Other BED ZF family TFs
Other Vitis vinifera TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_015328 Theobroma cacao TCM_015328 N 1.000
PK04121.1 Cannabis sativa PK04121.1 N 0.975
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.975
30169.m006547 Ricinus communis 30169.m006547 N 0.975
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.950
Cla004997 Citrullus lanatus Cla004997 N 0.950
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.950
gene13122-v1.0-hybrid Fragaria vesca gene13122-v1.0-hybrid N 0.925
MDP0000411586 Malus domestica MDP0000411586 N 0.900
MDP0000520527 Malus domestica MDP0000520527 N 0.900
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.875
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.872
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.846
Carubv10019846m.g Capsella rubella Carubv10019846m.g N 0.825
AT1G79740 Arabidopsis thaliana AT1G79740 N 0.825
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.750
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.718
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.700
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.700