MDP0000520527 (Malus domestica)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 MDP0000520527 T028412_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000520527 BED ZF 63 106

Links

Other BED ZF family TFs
Other Malus domestica TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000411586 Malus domestica MDP0000411586 N 1.000
PRUPE_ppa002763mg Prunus persica PRUPE_ppa002763mg N 0.925
TCM_015328 Theobroma cacao TCM_015328 N 0.900
gene13122-v1.0-hybrid Fragaria vesca gene13122-v1.0-hybrid N 0.900
PK04121.1 Cannabis sativa PK04121.1 N 0.900
VIT_16s0050g02440 Vitis vinifera VIT_16s0050g02440 N 0.900
GLYMA06G12991 Glycine max GLYMA06G12991 N 0.900
30169.m006547 Ricinus communis 30169.m006547 N 0.875
Cla004997 Citrullus lanatus Cla004997 N 0.875
Cucsa.201910 Cucumis sativus Cucsa.201910 N 0.875
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.821
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.795
AT1G79740 Arabidopsis thaliana AT1G79740 N 0.775
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.775
Carubv10019846m.g Capsella rubella Carubv10019846m.g N 0.775
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.718
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.700
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.700
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.700
OB01G17890 Oryza brachyantha OB01G17890 N 0.700