ENSCING00000014406 (Ciona intestinalis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSCING00000014406 T033283_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.912 0.865
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.912 0.865
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.912 0.865
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.912 0.865
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.912 0.865
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.912 0.865
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.912 0.865
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.912 0.865
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.912 0.865
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.912 0.865
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.912 0.865
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.912 0.865
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.912 0.865
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.912 0.865
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.912 0.865
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.912 0.865
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.912 0.865
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.912 0.865
crp
M03595_2.00 		Drosophila melanogaster
AACAGCTGWT
AWCAGCTGTT		 SELEX
Nitta et al.(2015)
crp_1 		0.845 0.750
crp
M05937_2.00 		Drosophila melanogaster
VAHCAGCTGAY
RTCAGCTGDWB		 B1H
Zhu et al.(2011)
crp_SANGER_10_FBgn0001994 		0.845 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000026074 bHLH 98 149

Links

Other bHLH family TFs
Other Ciona intestinalis TFs

100 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tfap4 Oryzias latipes ENSORLG00000015050 I 0.914
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I 0.914
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I 0.914
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I 0.914
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I 0.914
tfap4 Takifugu rubripes ENSTRUG00000013344 I 0.914
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I 0.914
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I 0.914
TFAP4 Bos taurus ENSBTAG00000033174 I 0.912
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.912
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.912
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.912
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.912
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.912
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.912
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I 0.912
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.912
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.912
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I 0.912
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.912
tfap4 Oryzias latipes ENSORLG00000008286 I 0.912
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.912
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.912
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.912
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I 0.912
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.912
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.912
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.912
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I 0.912
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.912
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I 0.912
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.912
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.912
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.912
tfap4 Takifugu rubripes ENSTRUG00000006111 I 0.912
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.912
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I 0.912
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.912
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.912
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.912
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.912
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.912
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.912
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.912
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.912
TFAP4 Homo sapiens ENSG00000090447 D 0.912
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.912
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.912
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.912
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.912
TFAP4 Equus caballus ENSECAG00000022311 I 0.912
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.912
tfap4 Danio rerio ENSDARG00000103923 I 0.912
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.912
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.912
TFAP4 Felis catus ENSFCAG00000011227 I 0.912
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.912
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.912
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.912
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.912
Tfap4 Mus musculus ENSMUSG00000005718 D 0.912
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.912
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.912
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.912
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.912
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.912
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.912
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.912
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I 0.903
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I 0.901
CapteG45346 Capitella teleta CapteG45346 I 0.901
CGI_10026909 Crassostrea gigas CGI_10026909 I 0.901
tfap4 Gasterosteus aculeatus ENSGACG00000011329 I 0.892
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I 0.888
L798_07621 Zootermopsis nevadensis L798_07621 I 0.886
GB48999 Apis mellifera GB48999 I 0.886
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.886
AGAP010201 Anopheles gambiae AGAP010201 I 0.886
Sakowv30040946m.g Saccoglossus kowalevskii Sakowv30040946m.g I 0.883
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I 0.873
ACYPI003006 Acyrthosiphon pisum ACYPI003006 I 0.863
tetur30g00270 Tetranychus urticae tetur30g00270 I 0.863
BGIBMGA010353 Bombyx mori BGIBMGA010353 I 0.856
KGM_15765 Danaus plexippus KGM_15765 I 0.856
HMEL008759 Heliconius melpomene HMEL008759 I 0.856
SPU_003179 Strongylocentrotus purpuratus SPU_003179 I 0.855
TCLT_0000678201 Thelazia callipaeda TCLT_0000678201 I 0.849
MDOA012071 Musca domestica MDOA012071 I 0.845
GF21721 Drosophila ananassae FBgn0098721 I 0.845
GH10096 Drosophila grimshawi FBgn0117577 I 0.845
GG24179 Drosophila erecta FBgn0116312 I 0.845
GA20511 Drosophila pseudoobscura FBgn0080505 I 0.845
crp Drosophila melanogaster FBgn0001994 D 0.845
GI14377 Drosophila mojavensis FBgn0137129 I 0.845
GL14101 Drosophila persimilis FBgn0151706 I 0.845
GK24289 Drosophila willistoni FBgn0226250 I 0.845
GJ16254 Drosophila virilis FBgn0203439 I 0.845
GD21926 Drosophila simulans FBgn0193342 I 0.845
GM17917 Drosophila sechellia FBgn0172824 I 0.845
GE19372 Drosophila yakuba FBgn0236717 I 0.845