Sakowv30040946m.g (Saccoglossus kowalevskii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Sakowv30040946m.g T048935_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.880 0.885
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.880 0.885
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.880 0.885
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.880 0.885
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.880 0.885
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.880 0.885
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.880 0.885
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.880 0.885
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.880 0.885
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.880 0.885
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.880 0.885
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.880 0.885
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.880 0.885
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.880 0.885
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.880 0.885
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.880 0.885
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.880 0.885
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.880 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23922570_peptide bHLH 46 97
23922571_peptide bHLH 46 97

Links

Other bHLH family TFs
Other Saccoglossus kowalevskii TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tfap4 Gasterosteus aculeatus ENSGACG00000011329 I 0.901
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I 0.894
CGI_10026909 Crassostrea gigas CGI_10026909 I 0.892
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I 0.883
tfap4 Takifugu rubripes ENSTRUG00000013344 I 0.883
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I 0.883
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I 0.883
ENSCING00000014406 Ciona intestinalis ENSCING00000014406 I 0.883
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I 0.883
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I 0.883
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I 0.883
tfap4 Oryzias latipes ENSORLG00000015050 I 0.883
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.880
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.880
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.880
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.880
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.880
tfap4 Oryzias latipes ENSORLG00000008286 I 0.880
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.880
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.880
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I 0.880
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.880
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.880
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.880
tfap4 Takifugu rubripes ENSTRUG00000006111 I 0.880
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.880
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.880
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.880
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.880
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I 0.880
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.880
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I 0.880
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.880
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.880
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I 0.880
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I 0.880
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.880
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.880
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.880
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I 0.880
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.880
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.880
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.880
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.880
tfap4 Danio rerio ENSDARG00000103923 I 0.880
TFAP4 Equus caballus ENSECAG00000022311 I 0.880
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.880
TFAP4 Felis catus ENSFCAG00000011227 I 0.880
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.880
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.880
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.880
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.880
CapteG45346 Capitella teleta CapteG45346 I 0.880
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.880
TFAP4 Bos taurus ENSBTAG00000033174 I 0.880
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.880
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.880
TFAP4 Homo sapiens ENSG00000090447 D 0.880
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.880
Tfap4 Mus musculus ENSMUSG00000005718 D 0.880
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.880
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.880
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.880
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.880
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.880
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.880
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.880
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.880
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.880
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I 0.880
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.880
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.880
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.880
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.880
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I 0.864
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I 0.856
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.855
GB48999 Apis mellifera GB48999 I 0.855
AGAP010201 Anopheles gambiae AGAP010201 I 0.855
L798_07621 Zootermopsis nevadensis L798_07621 I 0.855
NEMVEDRAFT_v1g112080 Nematostella vectensis NEMVEDRAFT_v1g112080 I 0.854
DAPPUDRAFT_303137 Daphnia pulex DAPPUDRAFT_303137 I 0.845