tfap4 (Gasterosteus aculeatus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSGACG00000011329 T034425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tfap4
M01717_2.00 		Mus musculus
VHCABVYGB
VCRBVTGDB		 PBM
Weirauch et al.(2014)
pTH5067 		0.894 0.942
TFAP4
M02776_2.00 		Homo sapiens
AWCAGCTGWY
RWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_1 		0.894 0.942
TFAP4
M02777_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Jolma et al.(2013)
TFAP4_2 		0.894 0.942
TFAP4
M04066_2.00 		Homo sapiens
VHCAKVTGDB
VHCABMTGDB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_1 		0.894 0.942
TFAP4
M04067_2.00 		Homo sapiens
VWCAGCTGWB
VWCAGCTGWB		 SELEX
Yin et al.(2017)
TFAP4_eDBD_HT-SELEX_2 		0.894 0.942
TFAP4
M04070_2.00 		Homo sapiens
RHCAYVTGDB
VHCABRTGDY		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_1 		0.894 0.942
TFAP4
M04071_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_HT-SELEX_2 		0.894 0.942
TFAP4
M08712_2.00 		Homo sapiens
VMNCAGCTGR
YCAGCTGNKB		 Misc
Kulakovskiy et al.(2013)
TFAP4_HUMAN.H11MO.0.A 		0.894 0.942
TFAP4
M09453_2.00 		Homo sapiens
NVHCAGCTGD
HCAGCTGDBN		 Misc
Heinz et al.(2010)
AML-Tfap4_GSE45738 		0.894 0.942
TFAP4
M09802_2.00 		Homo sapiens
MNGNCHVCAGCTGDBBBW
WVVVHCAGCTGBDGNCNK		 Transfac
Matys et al.(2006)
V$AP4_01 		0.894 0.942
TFAP4
M09803_2.00 		Homo sapiens
NNSAGCTGHB
VDCAGCTSNN		 Transfac
Matys et al.(2006)
V$AP4_Q5 		0.894 0.942
TFAP4
M09804_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_01 		0.894 0.942
TFAP4
M09805_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AP4_Q6_02 		0.894 0.942
TFAP4
M09806_2.00 		Homo sapiens
NVCAGCTGHB
VDCAGCTGBN		 Transfac
Matys et al.(2006)
V$AP4_Q6 		0.894 0.942
TFAP4
M04068_2.00 		Homo sapiens
DHCABMTGDN
NHCAKVTGDH		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_1 		0.894 0.942
TFAP4
M04069_2.00 		Homo sapiens
AWCAGCTGWT
AWCAGCTGWT		 SELEX
Yin et al.(2017)
TFAP4_eDBD_Methyl-HT-SELEX_2 		0.894 0.942
TFAP4
M04072_2.00 		Homo sapiens
VHCABVTGDB
VHCABVTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_1 		0.894 0.942
TFAP4
M04073_2.00 		Homo sapiens
VHCAGCTGDB
VHCAGCTGDB		 SELEX
Yin et al.(2017)
TFAP4_FL_Methyl-HT-SELEX_2 		0.894 0.942
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000014972 bHLH 49 100

Links

Other bHLH family TFs
Other Gasterosteus aculeatus TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30040946m.g Saccoglossus kowalevskii Sakowv30040946m.g I 0.901
ENSPSIG00000009002 Pelodiscus sinensis ENSPSIG00000009002 I 0.894
ENSPPYG00000007054 Pongo abelii ENSPPYG00000007054 I 0.894
TFAP4 Pan troglodytes ENSPTRG00000007713 I 0.894
ENSPFOG00000011355 Poecilia formosa ENSPFOG00000011355 I 0.894
ENSPVAG00000005418 Pteropus vampyrus ENSPVAG00000005418 I 0.894
ENSSHAG00000011487 Sarcophilus harrisii ENSSHAG00000011487 I 0.894
Tfap4 Rattus norvegicus ENSRNOG00000005227 I 0.894
TFAP4 Procavia capensis ENSPCAG00000011134 I 0.894
tfap4 Oryzias latipes ENSORLG00000008286 I 0.894
ENSOARG00000003120 Ovis aries ENSOARG00000003120 I 0.894
TFAP4 Ornithorhynchus anatinus ENSOANG00000019858 I 0.894
ENSNLEG00000009797 Nomascus leucogenys ENSNLEG00000009797 I 0.894
TFAP4 Oryctolagus cuniculus ENSOCUG00000024550 I 0.894
ENSONIG00000005196 Oreochromis niloticus ENSONIG00000005196 I 0.894
ENSSTOG00000028040 Ictidomys tridecemlineatus ENSSTOG00000028040 I 0.894
ENSOPRG00000001061 Ochotona princeps ENSOPRG00000001061 I 0.894
ENSPANG00000010499 Papio anubis ENSPANG00000010499 I 0.894
TFAP4 Tupaia belangeri ENSTBEG00000014089 I 0.894
Ogr05167 Ophisaurus gracilis Ogr05167 I 0.894
Myotis_brandtii_TFAP4_10028039 Myotis brandtii Myotis_brandtii_TFAP4_10028039 I 0.894
ENSP00000204517 Macaca fascicularis ENSP00000204517 I 0.894
Pvit_18996 Pogona vitticeps Pvit_18996 I 0.894
estExt_fgenesh2_pg.C_3260041 Branchiostoma floridae estExt_fgenesh2_pg.C_3260041 I 0.894
tfap4 Xenopus tropicalis XB-GENE-999265 I 0.894
fgenesh2_pg.scaffold_326000054 Branchiostoma floridae fgenesh2_pg.scaffold_326000054 I 0.894
ENSP00000204517-D1 Bos grunniens ENSP00000204517-D1 I 0.894
Cmyd_10017689 Chelonia mydas Cmyd_10017689 I 0.894
tfap4 Takifugu rubripes ENSTRUG00000006111 I 0.894
tfap4 Tetraodon nigroviridis ENSTNIG00000009740 I 0.894
TFAP4 Tursiops truncatus ENSTTRG00000002710 I 0.894
TFAP4 Vicugna pacos ENSVPAG00000008001 I 0.894
Alligator_sinensis_CCG004455.1 Alligator sinensis Alligator_sinensis_CCG004455.1 I 0.894
ENSXMAG00000004632 Xiphophorus maculatus ENSXMAG00000004632 I 0.894
Tfap4 Mus musculus ENSMUSG00000005718 D 0.894
TFAP4 Otolemur garnettii ENSOGAG00000008955 I 0.894
TFAP4 Echinops telfairi ENSETEG00000008634 I 0.894
TFAP4 Erinaceus europaeus ENSEEUG00000006004 I 0.894
ENSFALG00000004331 Ficedula albicollis ENSFALG00000004331 I 0.894
TFAP4 Felis catus ENSFCAG00000011227 I 0.894
TFAP4 Homo sapiens ENSG00000090447 D 0.894
TFAP4 Equus caballus ENSECAG00000022311 I 0.894
Tfap4 Dipodomys ordii ENSDORG00000004656 I 0.894
tfap4 Danio rerio ENSDARG00000103923 I 0.894
ENSCSAG00000009620 Chlorocebus sabaeus ENSCSAG00000009620 I 0.894
TFAP4 Cavia porcellus ENSCPOG00000004174 I 0.894
TFAP4 Dasypus novemcinctus ENSDNOG00000039193 I 0.894
ENSMPUG00000015023 Mustela putorius furo ENSMPUG00000015023 I 0.894
TFAP4 Gorilla gorilla ENSGGOG00000000451 I 0.894
TFAP4 Callithrix jacchus ENSCJAG00000019756 I 0.894
TFAP4 Anolis carolinensis ENSACAG00000016352 I 0.894
ENSLOCG00000002626 Lepisosteus oculatus ENSLOCG00000002626 I 0.894
ENSMEUG00000000888 Macropus eugenii ENSMEUG00000000888 I 0.894
TFAP4 Meleagris gallopavo ENSMGAG00000009411 I 0.894
TFAP4 Monodelphis domestica ENSMODG00000016377 I 0.894
TFAP4 Myotis lucifugus ENSMLUG00000005725 I 0.894
ENSAMEG00000002016 Ailuropoda melanoleuca ENSAMEG00000002016 I 0.894
TFAP4 Loxodonta africana ENSLAFG00000022341 I 0.894
TFAP4 Canis familiaris ENSCAFG00000019231 I 0.894
TFAP4 Bos taurus ENSBTAG00000033174 I 0.894
ENSLACG00000000328 Latimeria chalumnae ENSLACG00000000328 I 0.894
ENSXMAG00000011968 Xiphophorus maculatus ENSXMAG00000011968 I 0.892
ENSCING00000014406 Ciona intestinalis ENSCING00000014406 I 0.892
ENSCSAVG00000000333 Ciona savignyi ENSCSAVG00000000333 I 0.892
tfap4 Tetraodon nigroviridis ENSTNIG00000002015 I 0.892
ENSONIG00000016338 Oreochromis niloticus ENSONIG00000016338 I 0.892
tfap4 Takifugu rubripes ENSTRUG00000013344 I 0.892
ENSPFOG00000000836 Poecilia formosa ENSPFOG00000000836 I 0.892
tfap4 Tetraodon nigroviridis ENSTNIG00000014095 I 0.892
tfap4 Oryzias latipes ENSORLG00000015050 I 0.892
CGI_10026909 Crassostrea gigas CGI_10026909 I 0.883
CapteG45346 Capitella teleta CapteG45346 I 0.883
ENSGMOG00000014930 Gadus morhua ENSGMOG00000014930 I 0.883
ENSGMOG00000015232 Gadus morhua ENSGMOG00000015232 I 0.880
ENSAPLG00000013446 Anas platyrhynchos ENSAPLG00000013446 I 0.870
AGAP010201 Anopheles gambiae AGAP010201 I 0.864
LLOJ009485 Lutzomyia longipalpis LLOJ009485 I 0.864
L798_07621 Zootermopsis nevadensis L798_07621 I 0.864
GB48999 Apis mellifera GB48999 I 0.864
tfap4 Gasterosteus aculeatus ENSGACG00000018768 I 0.850
ACYPI003006 Acyrthosiphon pisum ACYPI003006 I 0.845
NEMVEDRAFT_v1g112080 Nematostella vectensis NEMVEDRAFT_v1g112080 I 0.845
DAPPUDRAFT_303137 Daphnia pulex DAPPUDRAFT_303137 I 0.843
tetur30g00270 Tetranychus urticae tetur30g00270 I 0.840