CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
30066.m000713
(
Ricinus communis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
30066.m000713
T047888_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30066.m000713
bHLH
128
178
ATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Ricinus communis
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10016461m.g
Citrus clementina
Ciclev10016461m.g
N
0.911
Solyc04g007300.2
Solanum lycopersicum
Solyc04g007300.2
I
0.879
cassava14677.m1
Manihot esculenta
cassava14677.m1
I
0.879
VIT_01s0011g03720
Vitis vinifera
VIT_01s0011g03720
I
0.879
Thhalv10008699m.g
Eutrema salsugineum
Thhalv10008699m.g
I
0.879
cassava46189.m1
Manihot esculenta
cassava46189.m1
I
0.879
evm.TU.supercontig_65.44
Carica papaya
evm.TU.supercontig_65.44
I
0.876
orange1.1g042908m.g
Citrus sinensis
orange1.1g042908m.g
I
0.876
MDP0000725991
Malus domestica
MDP0000725991
I
0.876
Bostr.12659s0424
Boechera stricta
Bostr.12659s0424
I
0.876
Pm029081
Prunus mume
Pm029081
I
0.876
PRUPE_ppa010885mg
Prunus persica
PRUPE_ppa010885mg
I
0.876
Bra010993
Brassica rapa
Bra010993
I
0.876
Bo3g138670
Brassica oleracea
Bo3g138670
I
0.876
BHLH75
Arabidopsis thaliana
AT1G25330
I
0.863
mgf026269m
Mimulus guttatus
mgf026269m
N
0.859
Aquca_041_00009
Aquilegia coerulea
Aquca_041_00009
I
0.858
gene03713-v1.0-hybrid
Fragaria vesca
gene03713-v1.0-hybrid
N
0.856
Cla008090
Citrullus lanatus
Cla008090
N
0.856
mgf017044m
Mimulus guttatus
mgf017044m
I
0.854
chr2.CM0903.30.nd
Lotus japonicus
chr2.CM0903.30.nd
I
0.854
PGSC0003DMG400004922
Solanum tuberosum
PGSC0003DMG400004922
I
0.852
Solyc04g077480.2
Solanum lycopersicum
Solyc04g077480.2
I
0.852
GSMUA_Achr1G09570_001
Musa acuminata
GSMUA_Achr1G09570_001
I
0.852
Carubv10010961m.g
Capsella rubella
Carubv10010961m.g
N
0.852
GSMUA_Achr9G09770_001
Musa acuminata
GSMUA_Achr9G09770_001
I
0.852
VIT_07s0151g00450
Vitis vinifera
VIT_07s0151g00450
I
0.852
GSMUA_AchrUn_randomG23560_001
Musa acuminata
GSMUA_AchrUn_randomG23560_001
I
0.852
Cagra.2231s0025
Capsella grandiflora
Cagra.2231s0025
N
0.852
TCM_019445
Theobroma cacao
TCM_019445
I
0.846
Gorai.008G055400
Gossypium raimondii
Gorai.008G055400
I
0.846
AMTR_s00079p00137860
Amborella trichopoda
AMTR_s00079p00137860
I
0.843
PDK_20s1896091g002
Phoenix dactylifera
PDK_20s1896091g002
N
0.842
GSMUA_Achr2G09660_001
Musa acuminata
GSMUA_Achr2G09660_001
I
0.839
GSMUA_Achr10G19850_001
Musa acuminata
GSMUA_Achr10G19850_001
N
0.839