Carubv10010961m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10010961m.g T049375_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010961m bHLH 115 165

Links

Other bHLH family TFs
Other Capsella rubella TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.2231s0025 Capsella grandiflora Cagra.2231s0025 N 0.914
Bostr.12659s0424 Boechera stricta Bostr.12659s0424 I 0.890
PRUPE_ppa010885mg Prunus persica PRUPE_ppa010885mg I 0.890
Pm029081 Prunus mume Pm029081 I 0.890
evm.TU.supercontig_65.44 Carica papaya evm.TU.supercontig_65.44 I 0.890
MDP0000725991 Malus domestica MDP0000725991 I 0.890
Bo3g138670 Brassica oleracea Bo3g138670 I 0.890
Bra010993 Brassica rapa Bra010993 I 0.890
orange1.1g042908m.g Citrus sinensis orange1.1g042908m.g I 0.890
Thhalv10008699m.g Eutrema salsugineum Thhalv10008699m.g I 0.887
cassava46189.m1 Manihot esculenta cassava46189.m1 I 0.887
VIT_01s0011g03720 Vitis vinifera VIT_01s0011g03720 I 0.887
cassava14677.m1 Manihot esculenta cassava14677.m1 I 0.887
Solyc04g007300.2 Solanum lycopersicum Solyc04g007300.2 I 0.887
BHLH75 Arabidopsis thaliana AT1G25330 I 0.878
gene03713-v1.0-hybrid Fragaria vesca gene03713-v1.0-hybrid N 0.870
Cla008090 Citrullus lanatus Cla008090 N 0.870
mgf017044m Mimulus guttatus mgf017044m I 0.869
mgf026269m Mimulus guttatus mgf026269m N 0.867
Aquca_041_00009 Aquilegia coerulea Aquca_041_00009 I 0.866
chr2.CM0903.30.nd Lotus japonicus chr2.CM0903.30.nd I 0.863
AMTR_s00079p00137860 Amborella trichopoda AMTR_s00079p00137860 I 0.857
Ciclev10016461m.g Citrus clementina Ciclev10016461m.g N 0.855
Gorai.008G055400 Gossypium raimondii Gorai.008G055400 I 0.854
TCM_019445 Theobroma cacao TCM_019445 I 0.854
GLYMA17G34010 Glycine max GLYMA17G34010 N 0.853
30066.m000713 Ricinus communis 30066.m000713 N 0.852
SapurV1A.1621s0020 Salix purpurea SapurV1A.1621s0020 I 0.845
Eucgr.K02229 Eucalyptus grandis Eucgr.K02229 I 0.845
SapurV1A.0719s0010 Salix purpurea SapurV1A.0719s0010 I 0.845
SapurV1A.0530s0010 Salix purpurea SapurV1A.0530s0010 I 0.845
Eucgr.B00731 Eucalyptus grandis Eucgr.B00731 I 0.845
Gorai.006G194500 Gossypium raimondii Gorai.006G194500 I 0.845
Gorai.006G060400 Gossypium raimondii Gorai.006G060400 I 0.845
MDP0000879337 Malus domestica MDP0000879337 I 0.845
POPTR_0012s05210 Populus trichocarpa POPTR_0012s05210 I 0.845
VIT_17s0000g03580 Vitis vinifera VIT_17s0000g03580 I 0.845
Cla018783 Citrullus lanatus Cla018783 I 0.845
PRUPE_ppa015301mg Prunus persica PRUPE_ppa015301mg I 0.845
Cla019256 Citrullus lanatus Cla019256 I 0.845
Pm025178 Prunus mume Pm025178 I 0.845
29974.m000242 Ricinus communis 29974.m000242 I 0.845
TCM_012362 Theobroma cacao TCM_012362 I 0.845
mgf013353m Mimulus guttatus mgf013353m I 0.845
Cucsa.111110 Cucumis sativus Cucsa.111110 I 0.845
POPTR_0015s03760 Populus trichocarpa POPTR_0015s03760 I 0.845
Ca_13025 Cicer arietinum Ca_13025 I 0.842
Lus10009673.g Linum usitatissimum Lus10009673.g I 0.842
Lus10009034.g Linum usitatissimum Lus10009034.g I 0.842
MTR_6g084120 Medicago truncatula MTR_6g084120 N 0.842
GLYMA09G31580 Glycine max GLYMA09G31580 I 0.842
GLYMA07G10311 Glycine max GLYMA07G10311 I 0.842