PGSC0003DMG400006345 (Solanum tuberosum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 PGSC0003DMG400006345 T066482_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TGA1A
M02662_2.00 		Nicotiana sp.
TGACGTD
HACGTCA		 SELEX
Mathelier et al.(2014)
MA0129.1 		0.792 0.960
TGA1A_TOBAC
M10081_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2_01 		0.792 0.960
TGA1A_TOBAC
M10082_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TGA1A_Q2 		0.792 0.960
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400016235 bZIP 57 106
PGSC0003DMT400016236 bZIP 66 115
PGSC0003DMT400016237 bZIP 66 115
PGSC0003DMT400016238 bZIP 66 115

Links

Other bZIP family TFs
Other Solanum tuberosum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g011670.2 Solanum lycopersicum Solyc04g011670.2 I 0.794
TGA1A Nicotiana sp. TGA1A_TOBAC D 0.792
TGA1A_TOBAC Nicotiana tabacum TGA1A_TOBAC D 0.792
Gorai.007G243200 Gossypium raimondii Gorai.007G243200 I 0.789
Cucsa.201510 Cucumis sativus Cucsa.201510 I 0.785
Solyc04g054320.2 Solanum lycopersicum Solyc04g054320.2 I 0.785
Cla014729 Citrullus lanatus Cla014729 I 0.785
PGSC0003DMG400012792 Solanum tuberosum PGSC0003DMG400012792 I 0.785
PRUPE_ppa007578mg Prunus persica PRUPE_ppa007578mg I 0.782