CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G243200
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.007G243200
T071940_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA1A
M02662_2.00
Nicotiana sp.
TGACGTD
HACGTCA
SELEX
Mathelier et al.(2014)
MA0129.1
0.786
0.824
TGA1A_TOBAC
M10081_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2_01
0.786
0.824
TGA1A_TOBAC
M10082_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1A_Q2
0.786
0.824
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G243200.1
bZIP
130
180
KPIDKIQRRLAQNREAARKSRLRKKAYVQQLENSRLKLIQLEQELQRATQQ
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.201510
Cucumis sativus
Cucsa.201510
I
0.790
Cla014729
Citrullus lanatus
Cla014729
I
0.790
PGSC0003DMG400006345
Solanum tuberosum
PGSC0003DMG400006345
I
0.789
Solyc04g011670.2
Solanum lycopersicum
Solyc04g011670.2
I
0.789
TGA1A_TOBAC
Nicotiana tabacum
TGA1A_TOBAC
D
0.786
TGA1A
Nicotiana sp.
TGA1A_TOBAC
D
0.786
Gorai.008G102300
Gossypium raimondii
Gorai.008G102300
N
0.784
Ca_12670
Cicer arietinum
Ca_12670
N
0.784
PGSC0003DMG400012792
Solanum tuberosum
PGSC0003DMG400012792
I
0.784
Solyc04g054320.2
Solanum lycopersicum
Solyc04g054320.2
I
0.784
orange1.1g018238m.g
Citrus sinensis
orange1.1g018238m.g
N
0.782
Ciclev10025940m.g
Citrus clementina
Ciclev10025940m.g
N
0.782