Alligator_sinensis_CCG016908.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG016908.1 T069868_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.869 0.905
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.869 0.905
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.869 0.905
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.869 0.905
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.869 0.905
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.869 0.905
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.869 0.905
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.869 0.905
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.869 0.905
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.869 0.905
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.817 0.635
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.817 0.635
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.817 0.635
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.817 0.635
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.817 0.635
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.817 0.635
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.817 0.635
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.817 0.635
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.817 0.635
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG016908.1 bZIP 1030 1094

Links

Other bZIP family TFs
Other Alligator sinensis TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATF6 Monodelphis domestica ENSMODG00000000980 I 0.885
ENSSHAG00000005867 Sarcophilus harrisii ENSSHAG00000005867 I 0.885
atf6 Xenopus tropicalis XB-GENE-983814 I 0.883
ATF6 Equus caballus ENSECAG00000022307 I 0.873
ENSMPUG00000003493 Mustela putorius furo ENSMPUG00000003493 I 0.873
ATF6 Vicugna pacos ENSVPAG00000004732 I 0.873
ATF6 Echinops telfairi ENSETEG00000004183 I 0.873
ATF6 Tursiops truncatus ENSTTRG00000008508 I 0.873
ATF6 Sus scrofa ENSSSCG00000006346 I 0.873
ENSOARG00000010418 Ovis aries ENSOARG00000010418 I 0.873
ATF6 Loxodonta africana ENSLAFG00000003622 I 0.873
ENSDNOG00000008226 Dasypus novemcinctus ENSDNOG00000008226 I 0.873
ATF6 Felis catus ENSFCAG00000023651 I 0.873
ATF6 Erinaceus europaeus ENSEEUG00000000007 I 0.873
ATF6 Choloepus hoffmanni ENSCHOG00000009031 I 0.873
ATF6 Bos taurus ENSBTAG00000005227 I 0.873
ENSP00000356919-D1 Bos grunniens ENSP00000356919-D1 I 0.873
ATF6 Canis familiaris ENSCAFG00000013068 I 0.873
ENSAMEG00000001631 Ailuropoda melanoleuca ENSAMEG00000001631 I 0.873
atf6.S Xenopus laevis XB-GENE-983817 I 0.871
ATF6 Taeniopygia guttata ENSTGUG00000017057 I 0.870
Brh_R005562 Buceros rhinoceros Brh_R005562 I 0.870
ENSFALG00000003490 Ficedula albicollis ENSFALG00000003490 I 0.870
ENSGALG00000002658 Gallus gallus ENSGALG00000002658 I 0.870
ENSAPLG00000013950 Anas platyrhynchos ENSAPLG00000013950 I 0.870
Gfo_R012350 Geospiza fortis Gfo_R012350 I 0.870
ATF6 Meleagris gallopavo ENSMGAG00000005185 I 0.870
Afo_R000376 Aptenodytes forsteri Afo_R000376 I 0.870
ENSPPYG00000000589 Pongo abelii ENSPPYG00000000589 I 0.869
ENSNLEG00000014528 Nomascus leucogenys ENSNLEG00000014528 I 0.869
ENSPANG00000021910 Papio anubis ENSPANG00000021910 I 0.869
ATF6 Otolemur garnettii ENSOGAG00000001917 I 0.869
ATF6 Pan troglodytes ENSPTRG00000001596 I 0.869
ATF6 Oryctolagus cuniculus ENSOCUG00000007930 I 0.869
ATF6 Homo sapiens ENSG00000118217 D 0.869
ENSTSYG00000002035 Tarsius syrichta ENSTSYG00000002035 I 0.869
ATF6 Callithrix jacchus ENSCJAG00000004572 I 0.869
Aan_R002718 Calypte anna Aan_R002718 I 0.869
ENSCSAG00000002721 Chlorocebus sabaeus ENSCSAG00000002721 I 0.869
ENSP00000356919 Macaca fascicularis ENSP00000356919 I 0.869
ATF6 Macaca mulatta ENSMMUG00000004049 I 0.869
Atf6 Rattus norvegicus ENSRNOG00000024632 I 0.869
ATF6 Cavia porcellus ENSCPOG00000010325 I 0.869
Atf6 Mus musculus ENSMUSG00000026663 I 0.869
ENSPSIG00000016522 Pelodiscus sinensis ENSPSIG00000016522 I 0.867
Myotis_brandtii_ATF6_10024274 Myotis brandtii Myotis_brandtii_ATF6_10024274 I 0.862
ENSMEUG00000008122 Macropus eugenii ENSMEUG00000008122 I 0.861
Pvit_17701 Pogona vitticeps Pvit_17701 I 0.861
ATF6 Gorilla gorilla ENSGGOG00000013807 I 0.859
ATF6 Ornithorhynchus anatinus ENSOANG00000009735 I 0.856
Pvit_13420 Pogona vitticeps Pvit_13420 I 0.855
ENSPMAG00000007037 Petromyzon marinus ENSPMAG00000007037 I 0.850
Alligator_sinensis_CCG007030.1 Alligator sinensis Alligator_sinensis_CCG007030.1 I 0.846
ENSAMXG00000010343 Astyanax mexicanus ENSAMXG00000010343 I 0.846
Ogr11447 Ophisaurus gracilis Ogr11447 I 0.846
ATF6B Anolis carolinensis ENSACAG00000010535 I 0.845
ATF6 Tupaia belangeri ENSTBEG00000015845 I 0.845
ATF6 Microcebus murinus ENSMICG00000000038 I 0.845
atf6 Danio rerio ENSDARG00000012656 I 0.839
CapteG216503 Capitella teleta CapteG216503 I 0.834
ENSLOCG00000001278 Lepisosteus oculatus ENSLOCG00000001278 I 0.832
Ogr01669 Ophisaurus gracilis Ogr01669 I 0.827
ENSSHAG00000010010 Sarcophilus harrisii ENSSHAG00000010010 I 0.823
ATF6B Tursiops truncatus ENSTTRG00000005958 I 0.817
ENSTSYG00000003325 Tarsius syrichta ENSTSYG00000003325 I 0.817
Atf6b Dipodomys ordii ENSDORG00000004227 I 0.817
ENSMPUG00000010305 Mustela putorius furo ENSMPUG00000010305 I 0.817
ATF6B Felis catus ENSFCAG00000018408 I 0.817
ATF6B Equus caballus ENSECAG00000021507 I 0.817
ENSSTOG00000027684 Ictidomys tridecemlineatus ENSSTOG00000027684 I 0.817
ATF6B Cavia porcellus ENSCPOG00000023551 I 0.817
ENSP00000364349 Macaca fascicularis ENSP00000364349 I 0.817
ATF6B Bos taurus ENSBTAG00000008794 I 0.817
ENSAMEG00000002381 Ailuropoda melanoleuca ENSAMEG00000002381 I 0.817
ATF6B Canis familiaris ENSCAFG00000000761 I 0.817
ATF6B Callithrix jacchus ENSCJAG00000036009 I 0.817
ENSCSAG00000009237 Chlorocebus sabaeus ENSCSAG00000009237 I 0.817
ATF6B Sus scrofa ENSSSCG00000001430 I 0.817
ATF6B Dasypus novemcinctus ENSDNOG00000042135 I 0.817
ATF6B Homo sapiens ENSG00000213676 D 0.817
ATF6B Macaca mulatta ENSMMUG00000015229 I 0.817
ENSNLEG00000006562 Nomascus leucogenys ENSNLEG00000006562 I 0.817
ATF6B Monodelphis domestica ENSMODG00000014920 I 0.817
ATF6B Oryctolagus cuniculus ENSOCUG00000023089 I 0.817
ATF6B Otolemur garnettii ENSOGAG00000032721 I 0.817
ATF6B Ochotona princeps ENSOPRG00000019053 I 0.817
ENSPANG00000006897 Papio anubis ENSPANG00000006897 I 0.817
ENSPPYG00000016479 Pongo abelii ENSPPYG00000016479 I 0.817
Atf6b Mus musculus ENSMUSG00000015461 I 0.817
ATF6B Pteropus vampyrus ENSPVAG00000005144 I 0.817
Atf6b Rattus norvegicus ENSRNOG00000000431 I 0.817
ATF6B Gorilla gorilla ENSGGOG00000004870 I 0.817
ATF6B Pan troglodytes ENSPTRG00000034357 I 0.815
atf6 Takifugu rubripes ENSTRUG00000006660 I 0.814
ATF6 Anolis carolinensis ENSACAG00000001336 I 0.814
Tal_R013420 Tyto alba Tal_R013420 I 0.813
ENSGMOG00000018033 Gadus morhua ENSGMOG00000018033 I 0.813
atf6 Gasterosteus aculeatus ENSGACG00000011702 I 0.807
atf6 Oryzias latipes ENSORLG00000016676 I 0.806
ENSONIG00000002137 Oreochromis niloticus ENSONIG00000002137 I 0.806
ATF6B Procavia capensis ENSPCAG00000009251 I 0.805
ATF6B Loxodonta africana ENSLAFG00000020739 I 0.805
ATF6B Myotis lucifugus ENSMLUG00000026641 I 0.798
SMAR005991 Strigamia maritima SMAR005991 I 0.798
Myotis_brandtii_ATF6B_10007217 Myotis brandtii Myotis_brandtii_ATF6B_10007217 I 0.798
ENSPFOG00000018418 Poecilia formosa ENSPFOG00000018418 I 0.794
ENSXMAG00000013231 Xiphophorus maculatus ENSXMAG00000013231 I 0.794
ENSLACG00000007649 Latimeria chalumnae ENSLACG00000007649 I 0.784
L798_08597 Zootermopsis nevadensis L798_08597 I 0.784
LotgiG236404 Lottia gigantea LotgiG236404 I 0.782
ENSLACG00000012831 Latimeria chalumnae ENSLACG00000012831 I 0.782