CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Atf6b
(
Mus musculus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSMUSG00000015461
T060455_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to contribute to DNA-binding transcription activator activity, RNA polymerase II-specific. Predicted to be involved in endoplasmic reticulum unfolded protein response; negative regulation of ATF6-mediated unfolded protein response; and positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress. Predicted to act upstream of or within response to unfolded protein. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of RNA polymerase II transcription regulator complex and protein-DNA complex. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Orthologous to human ATF6B (activating transcription factor 6 beta). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.883
1.000
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.883
1.000
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.883
1.000
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.883
1.000
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.883
1.000
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC
GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.883
1.000
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT
ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.883
1.000
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.883
1.000
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.883
1.000
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.832
0.625
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.832
0.625
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.832
0.625
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK
MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.832
0.625
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.832
0.625
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY
RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.832
0.625
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.832
0.625
ATF6
M09947_2.00
Homo sapiens
TGACGTGG
CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.832
0.625
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.832
0.625
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.832
0.625
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000015605
bZIP
327
390
AKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALLAENS
ENSMUSP00000133516
bZIP
330
393
AKLLKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALRRRLEALLAENS
Links
Other
bZIP
family TFs
Other
Mus musculus
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Atf6b
Dipodomys ordii
ENSDORG00000004227
I
0.883
ATF6B
Equus caballus
ENSECAG00000021507
I
0.883
ATF6B
Dasypus novemcinctus
ENSDNOG00000042135
I
0.883
ENSP00000364349
Macaca fascicularis
ENSP00000364349
I
0.883
ENSCSAG00000009237
Chlorocebus sabaeus
ENSCSAG00000009237
I
0.883
ENSNLEG00000006562
Nomascus leucogenys
ENSNLEG00000006562
I
0.883
ENSMPUG00000010305
Mustela putorius furo
ENSMPUG00000010305
I
0.883
ATF6B
Tursiops truncatus
ENSTTRG00000005958
I
0.883
ATF6B
Homo sapiens
ENSG00000213676
D
0.883
ENSTSYG00000003325
Tarsius syrichta
ENSTSYG00000003325
I
0.883
ATF6B
Felis catus
ENSFCAG00000018408
I
0.883
ATF6B
Monodelphis domestica
ENSMODG00000014920
I
0.883
ATF6B
Macaca mulatta
ENSMMUG00000015229
I
0.883
ENSSTOG00000027684
Ictidomys tridecemlineatus
ENSSTOG00000027684
I
0.883
ATF6B
Cavia porcellus
ENSCPOG00000023551
I
0.883
ENSAMEG00000002381
Ailuropoda melanoleuca
ENSAMEG00000002381
I
0.883
ENSPPYG00000016479
Pongo abelii
ENSPPYG00000016479
I
0.883
ATF6B
Pteropus vampyrus
ENSPVAG00000005144
I
0.883
Atf6b
Rattus norvegicus
ENSRNOG00000000431
I
0.883
ATF6B
Sus scrofa
ENSSSCG00000001430
I
0.883
ATF6B
Gorilla gorilla
ENSGGOG00000004870
I
0.883
ATF6B
Bos taurus
ENSBTAG00000008794
I
0.883
ATF6B
Otolemur garnettii
ENSOGAG00000032721
I
0.883
ATF6B
Callithrix jacchus
ENSCJAG00000036009
I
0.883
ATF6B
Oryctolagus cuniculus
ENSOCUG00000023089
I
0.883
ATF6B
Canis familiaris
ENSCAFG00000000761
I
0.883
ATF6B
Ochotona princeps
ENSOPRG00000019053
I
0.883
ENSPANG00000006897
Papio anubis
ENSPANG00000006897
I
0.883
ATF6B
Pan troglodytes
ENSPTRG00000034357
I
0.880
ENSSHAG00000010010
Sarcophilus harrisii
ENSSHAG00000010010
I
0.876
ATF6B
Procavia capensis
ENSPCAG00000009251
I
0.871
ATF6B
Loxodonta africana
ENSLAFG00000020739
I
0.871
Myotis_brandtii_ATF6B_10007217
Myotis brandtii
Myotis_brandtii_ATF6B_10007217
I
0.854
ATF6B
Myotis lucifugus
ENSMLUG00000026641
I
0.854
Ogr11447
Ophisaurus gracilis
Ogr11447
I
0.851
Alligator_sinensis_CCG007030.1
Alligator sinensis
Alligator_sinensis_CCG007030.1
I
0.851
ATF6B
Anolis carolinensis
ENSACAG00000010535
I
0.849
ENSBTAP00000042742-D1
Bos grunniens
ENSBTAP00000042742-D1
I
0.838
Pvit_17701
Pogona vitticeps
Pvit_17701
I
0.837
ENSPSIG00000016522
Pelodiscus sinensis
ENSPSIG00000016522
I
0.835
ENSNLEG00000014528
Nomascus leucogenys
ENSNLEG00000014528
I
0.832
ENSCSAG00000002721
Chlorocebus sabaeus
ENSCSAG00000002721
I
0.832
ATF6
Oryctolagus cuniculus
ENSOCUG00000007930
I
0.832
ATF6
Callithrix jacchus
ENSCJAG00000004572
I
0.832
ENSPPYG00000000589
Pongo abelii
ENSPPYG00000000589
I
0.832
ENSPANG00000021910
Papio anubis
ENSPANG00000021910
I
0.832
Atf6
Mus musculus
ENSMUSG00000026663
I
0.832
ATF6
Otolemur garnettii
ENSOGAG00000001917
I
0.832
ATF6
Cavia porcellus
ENSCPOG00000010325
I
0.832
ATF6
Pan troglodytes
ENSPTRG00000001596
I
0.832
ATF6
Macaca mulatta
ENSMMUG00000004049
I
0.832
ATF6
Homo sapiens
ENSG00000118217
D
0.832
Atf6
Rattus norvegicus
ENSRNOG00000024632
I
0.832
ENSTSYG00000002035
Tarsius syrichta
ENSTSYG00000002035
I
0.832
ENSP00000356919
Macaca fascicularis
ENSP00000356919
I
0.832
ENSAMXG00000010343
Astyanax mexicanus
ENSAMXG00000010343
I
0.831
ATF6
Gorilla gorilla
ENSGGOG00000013807
I
0.830
atf6
Oryzias latipes
ENSORLG00000016676
I
0.828
ENSONIG00000002137
Oreochromis niloticus
ENSONIG00000002137
I
0.828
ENSPMAG00000007037
Petromyzon marinus
ENSPMAG00000007037
I
0.828
ENSLOCG00000001278
Lepisosteus oculatus
ENSLOCG00000001278
I
0.826
Myotis_brandtii_ATF6_10024274
Myotis brandtii
Myotis_brandtii_ATF6_10024274
I
0.824
atf6
Danio rerio
ENSDARG00000012656
I
0.824
atf6
Takifugu rubripes
ENSTRUG00000006660
I
0.823
ENSGMOG00000018033
Gadus morhua
ENSGMOG00000018033
I
0.822
Pvit_13420
Pogona vitticeps
Pvit_13420
I
0.818
ATF6
Taeniopygia guttata
ENSTGUG00000017057
I
0.817
ATF6
Tursiops truncatus
ENSTTRG00000008508
I
0.817
ATF6
Vicugna pacos
ENSVPAG00000004732
I
0.817
Aan_R002718
Calypte anna
Aan_R002718
I
0.817
Alligator_sinensis_CCG016908.1
Alligator sinensis
Alligator_sinensis_CCG016908.1
I
0.817
Brh_R005562
Buceros rhinoceros
Brh_R005562
I
0.817
Gfo_R012350
Geospiza fortis
Gfo_R012350
I
0.817
Afo_R000376
Aptenodytes forsteri
Afo_R000376
I
0.817
ENSP00000356919-D1
Bos grunniens
ENSP00000356919-D1
I
0.817
ATF6
Sus scrofa
ENSSSCG00000006346
I
0.817
ENSOARG00000010418
Ovis aries
ENSOARG00000010418
I
0.817
ATF6
Erinaceus europaeus
ENSEEUG00000000007
I
0.817
ATF6
Equus caballus
ENSECAG00000022307
I
0.817
ATF6
Loxodonta africana
ENSLAFG00000003622
I
0.817
ATF6
Echinops telfairi
ENSETEG00000004183
I
0.817
ENSFALG00000003490
Ficedula albicollis
ENSFALG00000003490
I
0.817
ENSSHAG00000005867
Sarcophilus harrisii
ENSSHAG00000005867
I
0.817
ENSGALG00000002658
Gallus gallus
ENSGALG00000002658
I
0.817
ENSDNOG00000008226
Dasypus novemcinctus
ENSDNOG00000008226
I
0.817
ATF6
Meleagris gallopavo
ENSMGAG00000005185
I
0.817
ATF6
Bos taurus
ENSBTAG00000005227
I
0.817
ENSAPLG00000013950
Anas platyrhynchos
ENSAPLG00000013950
I
0.817
ENSAMEG00000001631
Ailuropoda melanoleuca
ENSAMEG00000001631
I
0.817
ATF6
Canis familiaris
ENSCAFG00000013068
I
0.817
ENSMPUG00000003493
Mustela putorius furo
ENSMPUG00000003493
I
0.817
ATF6
Choloepus hoffmanni
ENSCHOG00000009031
I
0.817
ATF6
Monodelphis domestica
ENSMODG00000000980
I
0.817
ATF6
Felis catus
ENSFCAG00000023651
I
0.817
atf6
Gasterosteus aculeatus
ENSGACG00000011702
I
0.816
atf6.S
Xenopus laevis
XB-GENE-983817
I
0.815
atf6
Xenopus tropicalis
XB-GENE-983814
I
0.815
ENSLACG00000012831
Latimeria chalumnae
ENSLACG00000012831
I
0.813
ENSPFOG00000018418
Poecilia formosa
ENSPFOG00000018418
I
0.812
ENSXMAG00000013231
Xiphophorus maculatus
ENSXMAG00000013231
I
0.812
ATF6
Anolis carolinensis
ENSACAG00000001336
I
0.810
ATF6
Tupaia belangeri
ENSTBEG00000015845
I
0.809
ATF6
Microcebus murinus
ENSMICG00000000038
I
0.809
CapteG216503
Capitella teleta
CapteG216503
I
0.806
Ogr01669
Ophisaurus gracilis
Ogr01669
I
0.805
L798_08597
Zootermopsis nevadensis
L798_08597
I
0.802
ATF6
Ornithorhynchus anatinus
ENSOANG00000009735
I
0.800
ENSMEUG00000008122
Macropus eugenii
ENSMEUG00000008122
I
0.793
LotgiG236404
Lottia gigantea
LotgiG236404
I
0.788
Ocbimv22023518m.g
Octopus bimaculoides
Ocbimv22023518m.g
I
0.786
Sakowv30004199m.g
Saccoglossus kowalevskii
Sakowv30004199m.g
I
0.785