CBN25087 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN25087 T083067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tra-1
M10386_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_01 		0.812 0.967
tra-1
M10387_2.00 		Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_02 		0.812 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN25087 C2H2 ZF 272 298
CBN25087 C2H2 ZF 305 328
CBN25087 C2H2 ZF 334 359
CBN25087 C2H2 ZF 365 390

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA00622 Caenorhabditis japonica CJA00622 I 0.824
CBG13188 Caenorhabditis briggsae CBG13188 I 0.815
CRE04883 Caenorhabditis remanei CRE04883 I 0.815
tra-1 Caenorhabditis elegans WBGene00006604 D 0.812