CBN30944 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN30944 T083095_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
che-1
M00609_2.00 		Caenorhabditis elegans
NGAARCCHNN
NNDGGYTTCN		 PBM
Narasimhan et al.(2015)
pTH10015 		0.827 1.000
che-1
M08451_2.00 		Caenorhabditis elegans
SGYTTC
GAARCS		 COMPILED
Mathelier et al.(2014)
MA0260.1 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN30944 C2H2 ZF 40 62
CBN30944 C2H2 ZF 68 90
CBN30944 C2H2 ZF 96 118
CBN30944 C2H2 ZF 124 146

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE23561 Caenorhabditis remanei CRE23561 I 0.827
che-1 Caenorhabditis elegans WBGene00000483 D 0.827
CBG12674 Caenorhabditis briggsae CBG12674 I 0.825
NBR_0000131901 Nippostrongylus brasiliensis NBR_0000131901 I 0.770
maker-nMf.1.1.scaf05782-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05782-augustus-gene-0.8 I 0.770
HPLM_0001518701 Haemonchus placei HPLM_0001518701 I 0.770
Minc12570 Meloidogyne incognita Minc12570 I 0.770
NECAME_14596 Necator americanus NECAME_14596 I 0.769
TCNE_0000019201 Toxocara canis TCNE_0000019201 I 0.767
scaffold142-EXSNAP2012.10 Pristionchus exspectatus scaffold142-EXSNAP2012.10 I 0.758