si:ch211-263k4.2 (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000006600 T095606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM16
M10223_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_03
0.772 0.921
PRDM16
M10224_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_04
0.772 0.921
PRDM16
M10225_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM16_05
0.772 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000008736 C2H2 ZF 88 109
ENSGACP00000008736 C2H2 ZF 137 159
ENSGACP00000008736 C2H2 ZF 165 187
ENSGACP00000008736 C2H2 ZF 193 216
ENSGACP00000008736 C2H2 ZF 222 244
ENSGACP00000008736 C2H2 ZF 250 272
ENSGACP00000008736 C2H2 ZF 279 300
ENSGACP00000008736 C2H2 ZF 849 871
ENSGACP00000008736 C2H2 ZF 877 900
ENSGACP00000008736 C2H2 ZF 906 928

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASCL1 Homo sapiens ENSG00000139352 D 0.000
Ascl1 Mus musculus ENSMUSG00000020052 D 0.000
ascl1.S Xenopus laevis XB-GENE-17340658 I 0.000
ascl1b Takifugu rubripes ENSTRUG00000011651 I 0.000
ascl1b Tetraodon nigroviridis ENSTNIG00000011380 I 0.000
ENSSTOG00000028420 Ictidomys tridecemlineatus ENSSTOG00000028420 I 0.000
ENSSHAG00000011936 Sarcophilus harrisii ENSSHAG00000011936 I 0.000
Ascl1 Rattus norvegicus ENSRNOG00000004294 I 0.000
ASCL1 Pteropus vampyrus ENSPVAG00000011272 I 0.000
ENSPPYG00000004884 Pongo abelii ENSPPYG00000004884 I 0.000
ENSPFOG00000020633 Poecilia formosa ENSPFOG00000020633 I 0.000
ENSPFOG00000018073 Poecilia formosa ENSPFOG00000018073 I 0.000
ascl1a Oryzias latipes ENSORLG00000016504 I 0.000
ascl1b Oryzias latipes ENSORLG00000012117 I 0.000
ascl1a Takifugu rubripes ENSTRUG00000012801 I 0.000
ASCL1 Tursiops truncatus ENSTTRG00000016243 I 0.000
ascl1.L Xenopus laevis XB-GENE-1032969 I 0.000
ascl1 Xenopus tropicalis XB-GENE-1032967 I 0.000
Sakowv30008499m.g Saccoglossus kowalevskii Sakowv30008499m.g I 0.000
Pvit_15764 Pogona vitticeps Pvit_15764 I 0.000
Ogr16040 Ophisaurus gracilis Ogr16040 I 0.000
Ogr07565 Ophisaurus gracilis Ogr07565 I 0.000
Myotis_brandtii_ASCL1_10010089 Myotis brandtii Myotis_brandtii_ASCL1_10010089 I 0.000
ENSP00000266744 Macaca fascicularis ENSP00000266744 I 0.000
ENSBTAP00000021592-D1 Bos grunniens ENSBTAP00000021592-D1 I 0.000
ENSXMAG00000019890 Xiphophorus maculatus ENSXMAG00000019890 I 0.000
ENSXMAG00000019614 Xiphophorus maculatus ENSXMAG00000019614 I 0.000
ASCL1 Vicugna pacos ENSVPAG00000002018 I 0.000
ENSONIG00000021219 Oreochromis niloticus ENSONIG00000021219 I 0.000
ENSONIG00000020440 Oreochromis niloticus ENSONIG00000020440 I 0.000
ASCL1 Felis catus ENSFCAG00000008250 I 0.000
ASCL1 Dasypus novemcinctus ENSDNOG00000001616 I 0.000
ascl1b Danio rerio ENSDARG00000101628 I 0.000
ascl1a Danio rerio ENSDARG00000038386 I 0.000
ENSCSAG00000018938 Chlorocebus sabaeus ENSCSAG00000018938 I 0.000
ASCL1 Cavia porcellus ENSCPOG00000020666 I 0.000
ASCL1 Callithrix jacchus ENSCJAG00000014345 I 0.000
ASCL1 Canis familiaris ENSCAFG00000007324 I 0.000
ASCL1 Bos taurus ENSBTAG00000016227 I 0.000
ENSAMXG00000025568 Astyanax mexicanus ENSAMXG00000025568 I 0.000
ENSAMXG00000024858 Astyanax mexicanus ENSAMXG00000024858 I 0.000
ascl1b Gasterosteus aculeatus ENSGACG00000011375 I 0.000
ascl1a Gasterosteus aculeatus ENSGACG00000020048 I 0.000
ASCL1 Gorilla gorilla ENSGGOG00000005479 I 0.000
ASCL1 Otolemur garnettii ENSOGAG00000030324 I 0.000
ASCL1 Oryctolagus cuniculus ENSOCUG00000006992 I 0.000
ENSOARG00000015879 Ovis aries ENSOARG00000015879 I 0.000
ASCL1 Ornithorhynchus anatinus ENSOANG00000013973 I 0.000
ENSNLEG00000006410 Nomascus leucogenys ENSNLEG00000006410 I 0.000
ASCL1 Monodelphis domestica ENSMODG00000002347 I 0.000
ASCL1 Macaca mulatta ENSMMUG00000005747 I 0.000
ENSMEUG00000010370 Macropus eugenii ENSMEUG00000010370 I 0.000
ENSLACG00000010712 Latimeria chalumnae ENSLACG00000010712 I 0.000
ENSGMOG00000009589 Gadus morhua ENSGMOG00000009589 I 0.000
ENSGMOG00000002268 Gadus morhua ENSGMOG00000002268 I 0.000
ENSAMEG00000006449 Ailuropoda melanoleuca ENSAMEG00000006449 I 0.000