Znf740 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012192 T108971_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Zfp740
M00784_2.00
Mus musculus
MCCCCCCNHN

NDNGGGGGGK
PBM
Weirauch et al.(2013)
pTH2857
0.827 1.000
Zfp740
M00143_2.00
Mus musculus
HMCCCCCNNN

NNNGGGGGKD
PBM
Badis et al.(2009)
Zfp740_0925
0.827 1.000
Zfp740
M02935_2.00
Mus musculus
NCCCCCCCAH

DTGGGGGGGN
SELEX
Jolma et al.(2013)
Zfp740_1
0.827 1.000
ZNF740
M02891_2.00
Homo sapiens
VCCCCCCCMY

RKGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_1
0.807 0.956
ZNF740
M02892_2.00
Homo sapiens
VCCCCCCCAY

RTGGGGGGGB
SELEX
Jolma et al.(2013)
ZNF740_2
0.807 0.956
ZNF740
M04467_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_eDBD_HT-SELEX
0.807 0.956
ZNF740
M04469_2.00
Homo sapiens
NYNCCCCCCCCAC

GTGGGGGGGGNRN
SELEX
Yin et al.(2017)
ZNF740_FL_HT-SELEX
0.807 0.956
ZNF740
M10221_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF740_02
0.807 0.956
ZNF740
M04468_2.00
Homo sapiens
YYDCCCCCCCCAY

RTGGGGGGGGHRR
SELEX
Yin et al.(2017)
ZNF740_eDBD_Methyl-HT-SELEX
0.807 0.956
ZNF740
M04470_2.00
Homo sapiens
NYVCCCCCCCCAC

GTGGGGGGGGBRN
SELEX
Yin et al.(2017)
ZNF740_FL_Methyl-HT-SELEX
0.807 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000016240 C2H2 ZF 113 135
ENSRNOP00000016240 C2H2 ZF 141 163
ENSRNOP00000016240 C2H2 ZF 169 190

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000393801 Angiostrongylus costaricensis ACOC_0000393801 I 0.000
ACUA026846 Anopheles culicifacies ACUA026846 N 0.000
ACYPI007360 Acyrthosiphon pisum ACYPI007360 N 0.000
AEPI008243 Anopheles epiroticus AEPI008243 I 0.000
Afo_R008309 Aptenodytes forsteri Afo_R008309 I 0.000
ANCCEY_11361 Ancylostoma ceylanicum ANCCEY_11361 I 0.000
ANCDUO_01775 Ancylostoma duodenale ANCDUO_01775 I 0.000
A_00975 Schistosoma haematobium A_00975 I 0.000
Brh_R009027 Buceros rhinoceros Brh_R009027 I 0.000
Brh_R010078 Buceros rhinoceros Brh_R010078 I 0.000
CJA08488 Caenorhabditis japonica CJA08488 I 0.000
Cmyd_10006886 Chelonia mydas Cmyd_10006886 N 0.000
CRE30241 Caenorhabditis remanei CRE30241 I 0.000
csin104516 Clonorchis sinensis csin104516 N 0.000
csin111503 Clonorchis sinensis csin111503 N 0.000
C_01049 Schistosoma haematobium C_01049 N 0.000
D915_05491 Fasciola hepatica D915_05491 I 0.000
D915_09728 Fasciola hepatica D915_09728 N 0.000
DILT_0000834901 Diphyllobothrium latum DILT_0000834901 I 0.000
EEL_0000283301 Elaeophora elaphi EEL_0000283301 N 0.000
EFV59996 Trichinella spiralis EFV59996 N 0.000
EFV60006 Trichinella spiralis EFV60006 N 0.000
ENSACAG00000003721 Anolis carolinensis ENSACAG00000003721 I 0.000
CABZ01017151.1 Danio rerio ENSDARG00000104156 I 0.000
ENSDORG00000008440 Dipodomys ordii ENSDORG00000008440 N 0.000
PBX1 Homo sapiens ENSG00000185630 D 0.000
ENSGMOG00000006428 Gadus morhua ENSGMOG00000006428 I 0.000
ENSLACG00000016442 Latimeria chalumnae ENSLACG00000016442 I 0.000
ENSLOCG00000006841 Lepisosteus oculatus ENSLOCG00000006841 I 0.000
ENSMEUG00000001401 Macropus eugenii ENSMEUG00000001401 N 0.000
ENSMEUG00000002971 Macropus eugenii ENSMEUG00000002971 I 0.000
ENSMEUG00000006330 Macropus eugenii ENSMEUG00000006330 I 0.000
HOXB8 Monodelphis domestica ENSMODG00000009593 N 0.000
Pbx1 Mus musculus ENSMUSG00000052534 D 0.000
PBX4 Oryctolagus cuniculus ENSOCUG00000029208 I 0.000
PBX1 Oryzias latipes ENSORLG00000016702 I 0.000
ENSSTOG00000013679 Ictidomys tridecemlineatus ENSSTOG00000013679 I 0.000
ENSTBEG00000005238 Tupaia belangeri ENSTBEG00000005238 I 0.000
ENSTBEG00000007209 Tupaia belangeri ENSTBEG00000007209 N 0.000
PBX3 Tupaia belangeri ENSTBEG00000016855 I 0.000
EVEC_0000238601 Enterobius vermicularis EVEC_0000238601 I 0.000
e_gw.260.85.1 Branchiostoma floridae e_gw.260.85.1 N 0.000
fgenesh1_pg.C_scaffold_1001003 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_1001003 I 0.000
GPLIN_000241000 Globodera pallida GPLIN_000241000 N 0.000
HelroG91488 Helobdella robusta HelroG91488 N 0.000
HmN_000399900 Hymenolepis microstoma HmN_000399900 N 0.000
HmN_000400100 Hymenolepis microstoma HmN_000400100 I 0.000
L893_g7450 Steinernema glaseri L893_g7450 N 0.000
L898_g16919 Steinernema monticolum L898_g16919 N 0.000
Lus10025232.g Linum usitatissimum Lus10025232.g N 0.000
maker-nMf.1.1.scaf05338-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf05338-augustus-gene-0.5 N 0.000
MCOS_0001038501 Mesocestoides corti MCOS_0001038501 I 0.000
MDOA002143 Musca domestica MDOA002143 I 0.000
MESCA000707 Megaselia scalaris MESCA000707 I 0.000
MhA1_Contig138.frz3.gene24 Meloidogyne hapla MhA1_Contig138.frz3.gene24 I 0.000
MYCFIDRAFT_76128 Pseudocercospora fijiensis MYCFIDRAFT_76128 I 0.000
Myotis_brandtii_MIMI_L668_10004071 Myotis brandtii Myotis_brandtii_MIMI_L668_10004071 I 0.000
Myotis_brandtii_MIMI_R196_10004074 Myotis brandtii Myotis_brandtii_MIMI_R196_10004074 I 0.000
nRc.2.0.1.g42753 Romanomermis culicivorax nRc.2.0.1.g42753 N 0.000
O9G_001635 Rozella allomycis O9G_001635 N 0.000
Ogr15448 Ophisaurus gracilis Ogr15448 I 0.000
ORUFI07G17770 Oryza rufipogon ORUFI07G17770 N 0.000
PPAI000859 Phlebotomus papatasi PPAI000859 I 0.000
Pvit_07422 Pogona vitticeps Pvit_07422 N 0.000
PXEA_0002877701 Protopolystoma xenopodis PXEA_0002877701 N 0.000
Sakowv30000867m.g Saccoglossus kowalevskii Sakowv30000867m.g I 0.000
SBAD_0000181501 Soboliphyme baturini SBAD_0000181501 N 0.000
SBAD_0000184901 Soboliphyme baturini SBAD_0000184901 I 0.000
Sjc_0117080 Schistosoma japonicum Sjc_0117080 N 0.000
Sjc_0133190 Schistosoma japonicum Sjc_0133190 N 0.000
Smp_087070 Schistosoma mansoni Smp_087070 N 0.000
SMTD_0000803701 Schistosoma mattheei SMTD_0000803701 N 0.000
SPER_0002304201 Spirometra erinaceieuropaei SPER_0002304201 N 0.000
SVUK_0000462001 Strongylus vulgaris SVUK_0000462001 I 0.000
T265_04102 Opisthorchis viverrini T265_04102 N 0.000
T265_14910 Opisthorchis viverrini T265_14910 I 0.000
Tal_R010888 Tyto alba Tal_R010888 I 0.000
TASK_0000335401 Taenia asiatica TASK_0000335401 N 0.000
TCNE_0000805901 Toxocara canis TCNE_0000805901 I 0.000
TELCIR_02026 Teladorsagia circumcincta TELCIR_02026 I 0.000
UCRNP2_7717 Neofusicoccum parvum UCRNP2_7717 I 0.000
WUBG_08134 Wuchereria bancrofti WUBG_08134 N 0.000
hoxd9.S Xenopus laevis XB-GENE-485796 I 0.000