sp5l (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000015074 T112118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP4
M02879_2.00 		Homo sapiens
NWRGCCACGCCCMCHYN
NRDGKGGGCGTGGCYWN		 SELEX
Jolma et al.(2013)
SP4_1 		0.774 0.848
SP4
M08296_2.00 		Homo sapiens
NNVGCYCCKCCYMYH
DRKRGGMGGRGCBNN		 ChIP-seq
Schmitges et al.(2016)
Q02446.MEME 		0.774 0.848
SP4
M08873_2.00 		Homo sapiens
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_HUMAN.H11MO.0.A 		0.774 0.848
SP4
M10165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q3 		0.774 0.848
SP4
M10166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP4_Q5 		0.774 0.848
Sp3
M08978_2.00 		Mus musculus
NBBNVSCCCCKCCCMBBBNN
NNVVVKGGGMGGGGSBNVVN		 Misc
Kulakovskiy et al.(2013)
SP3_MOUSE.H11MO.0.B 		0.760 0.818
Sp4
M01862_2.00 		Mus musculus
NMCGCCCMY
RKGGGCGKN		 PBM
Weirauch et al.(2014)
pTH4998 		0.758 0.833
Sp4
M00133_2.00 		Mus musculus
HMCGCCCMYN
NRKGGGCGKD		 PBM
Badis et al.(2009)
Sp4_1011 		0.758 0.833
Sp4
M05859_2.00 		Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH		 SMiLE-seq
Isakova et al.(2017)
SP4 		0.758 0.833
Sp4
M08975_2.00 		Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV		 Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B 		0.758 0.833
Spps
M06159_2.00 		Drosophila melanogaster
KWDRCCMCGCCCMBH
DVKGGGCGKGGYHWM		 B1H
Zhu et al.(2011)
CG5669_SANGER_10_FBgn0039169 		0.758 0.788
Spps
M06160_2.00 		Drosophila melanogaster
BDDGCCMCGCCCMYN
NRKGGGCGKGGCHHV		 B1H
Zhu et al.(2011)
CG5669_SOLEXA_5_FBgn0039169 		0.758 0.788
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000018127 C2H2 ZF 243 264
ENSTNIP00000018127 C2H2 ZF 272 296
ENSTNIP00000018127 C2H2 ZF 302 324

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000010161 Xiphophorus maculatus ENSXMAG00000010161 I 0.814
sp5l Oryzias latipes ENSORLG00000007526 I 0.814
ENSONIG00000012117 Oreochromis niloticus ENSONIG00000012117 I 0.814
ENSGMOG00000004393 Gadus morhua ENSGMOG00000004393 I 0.814
sp5l Gasterosteus aculeatus ENSGACG00000008991 I 0.814
ENSPFOG00000008204 Poecilia formosa ENSPFOG00000008204 I 0.814
sp5l Danio rerio ENSDARG00000010124 I 0.810
sp5l.S Xenopus laevis XB-GENE-6485591 I 0.802
sp5l Xenopus tropicalis XB-GENE-1000647 I 0.802
ENSAMXG00000013057 Astyanax mexicanus ENSAMXG00000013057 I 0.798
sp5l Takifugu rubripes ENSTRUG00000012835 I 0.794
ENSACAG00000028172 Anolis carolinensis ENSACAG00000028172 I 0.786
Pvit_05803 Pogona vitticeps Pvit_05803 I 0.786
ENSPANG00000006251 Papio anubis ENSPANG00000006251 I 0.774
SP4 Homo sapiens ENSG00000105866 D 0.774
SP4 Otolemur garnettii ENSOGAG00000007284 I 0.774
SP4 Gorilla gorilla ENSGGOG00000001332 I 0.774
sp5.L Xenopus laevis XB-GENE-6254266 I 0.774
sp5 Xenopus tropicalis XB-GENE-1217606 I 0.774
SP4 Macaca mulatta ENSMMUG00000021684 I 0.774
ENSNLEG00000016733 Nomascus leucogenys ENSNLEG00000016733 I 0.774
ENSOARG00000010410 Ovis aries ENSOARG00000010410 I 0.774
ENSGALG00000010905 Gallus gallus ENSGALG00000010905 I 0.774
ENSPPYG00000017746 Pongo abelii ENSPPYG00000017746 I 0.774
SP4 Equus caballus ENSECAG00000023324 I 0.774
SP4 Callithrix jacchus ENSCJAG00000001282 I 0.774
SP4 Tursiops truncatus ENSTTRG00000001927 I 0.774
SP4 Anolis carolinensis ENSACAG00000014193 I 0.774
LotgiG58417 Lottia gigantea LotgiG58417 I 0.774
ENSP00000222584-D1 Bos grunniens ENSP00000222584-D1 I 0.774
SP4 Bos taurus ENSBTAG00000014389 I 0.774
ENSP00000222584 Macaca fascicularis ENSP00000222584 I 0.774
SP4 Pan troglodytes ENSPTRG00000018970 I 0.774
ENSCSAG00000013609 Chlorocebus sabaeus ENSCSAG00000013609 I 0.774
SP4 Meleagris gallopavo ENSMGAG00000010367 I 0.774
SP4 Cavia porcellus ENSCPOG00000015154 I 0.774
sp5.S Xenopus laevis XB-GENE-1217613 I 0.772
NEMVEDRAFT_v1g99612 Nematostella vectensis NEMVEDRAFT_v1g99612 I 0.771
SMAR004861 Strigamia maritima SMAR004861 I 0.771
TriadG17488 Trichoplax adhaerens TriadG17488 I 0.771
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I 0.771
Sakowv30026949m.g Saccoglossus kowalevskii Sakowv30026949m.g I 0.771
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.771
SPU_024189 Strongylocentrotus purpuratus SPU_024189 I 0.771
Ocbimv22028510m.g Octopus bimaculoides Ocbimv22028510m.g I 0.771
CGI_10007690 Crassostrea gigas CGI_10007690 I 0.771
L798_03976 Zootermopsis nevadensis L798_03976 I 0.770
ENSGMOG00000001311 Gadus morhua ENSGMOG00000001311 I 0.770
CLEC006997 Cimex lectularius CLEC006997 I 0.767
ENSGALG00000028401 Gallus gallus ENSGALG00000028401 I 0.766
Gfo_R005030 Geospiza fortis Gfo_R005030 I 0.766
PHUM363930 Pediculus humanus PHUM363930 I 0.766
ENSAPLG00000007170 Anas platyrhynchos ENSAPLG00000007170 I 0.766
SP1 Taeniopygia guttata ENSTGUG00000015642 I 0.766
EFV52785 Trichinella spiralis EFV52785 I 0.765
D917_06327 Trichinella nativa D917_06327 I 0.765
ENSLOCG00000007577 Lepisosteus oculatus ENSLOCG00000007577 I 0.765
SP5 Taeniopygia guttata ENSTGUG00000008736 I 0.764
PXEA_0002750301 Protopolystoma xenopodis PXEA_0002750301 I 0.764
AQUA008497 Anopheles quadriannulatus AQUA008497 I 0.763
AGAP004438 Anopheles gambiae AGAP004438 I 0.763
AMEM016115 Anopheles merus AMEM016115 I 0.763
AARA006360 Anopheles arabiensis AARA006360 I 0.763
LotgiG126809 Lottia gigantea LotgiG126809 I 0.762
Ocbimv22017043m.g Octopus bimaculoides Ocbimv22017043m.g I 0.761
SP3 Tursiops truncatus ENSTTRG00000016998 I 0.760
ENSSTOG00000023955 Ictidomys tridecemlineatus ENSSTOG00000023955 I 0.760
ENSSSCG00000026327 Sus scrofa ENSSSCG00000026327 I 0.760
ENSOARG00000000469 Ovis aries ENSOARG00000000469 I 0.760
SP3 Sus scrofa ENSSSCG00000015962 I 0.760
Sp3 Mus musculus ENSMUSG00000027109 D 0.760
ASTEI04919 Anopheles stephensi ASTEI04919 I 0.760
ENSBTAP00000000201-D1 Bos grunniens ENSBTAP00000000201-D1 I 0.760
SP3 Cavia porcellus ENSCPOG00000002942 I 0.760
ACHR002282 Anopheles christyi ACHR002282 I 0.760
SP3 Bos taurus ENSBTAG00000000176 I 0.760
Sp3 Rattus norvegicus ENSRNOG00000060479 I 0.760
ACUA022057 Anopheles culicifacies ACUA022057 I 0.760
HelroG136356 Helobdella robusta HelroG136356 I 0.760
AMAM018005 Anopheles maculatus AMAM018005 I 0.760
AFUN009419 Anopheles funestus AFUN009419 I 0.760
SP3 Anolis carolinensis ENSACAG00000017061 I 0.760
Sp3 Dipodomys ordii ENSDORG00000009045 I 0.760
SP3 Erinaceus europaeus ENSEEUG00000005069 I 0.760
TRE_0001792901 Trichobilharzia regenti TRE_0001792901 I 0.760
SP3 Otolemur garnettii ENSOGAG00000026846 I 0.760
SP3 Pteropus vampyrus ENSPVAG00000000981 I 0.760
SP3 Dasypus novemcinctus ENSDNOG00000048996 I 0.760
Aan_R001055 Calypte anna Aan_R001055 I 0.758
tetur08g03750 Tetranychus urticae tetur08g03750 I 0.758
Alligator_sinensis_CCG001290.1 Alligator sinensis Alligator_sinensis_CCG001290.1 I 0.758
Afo_R003455 Aptenodytes forsteri Afo_R003455 I 0.758
Myotis_brandtii_SP4_10031725 Myotis brandtii Myotis_brandtii_SP4_10031725 I 0.758
estExt_fgenesh2_pg.C_1820063 Branchiostoma floridae estExt_fgenesh2_pg.C_1820063 I 0.758
estExt_fgenesh2_pg.C_1190055 Branchiostoma floridae estExt_fgenesh2_pg.C_1190055 I 0.758
Sakowv30026929m.g Saccoglossus kowalevskii Sakowv30026929m.g I 0.758
sp4.L Xenopus laevis XB-GENE-983121 I 0.758
HHAL002953-PA Halyomorpha halys HHAL002953-PA I 0.758
sp4 Xenopus tropicalis XB-GENE-983118 I 0.758
estExt_fgenesh2_pg.C_1190044 Branchiostoma floridae estExt_fgenesh2_pg.C_1190044 I 0.758
e_gw.339.61.1 Branchiostoma floridae e_gw.339.61.1 I 0.758
Gfo_R015871 Geospiza fortis Gfo_R015871 I 0.758
Cmyd_10011498 Chelonia mydas Cmyd_10011498 I 0.758
Ogr11542 Ophisaurus gracilis Ogr11542 I 0.758
Pvit_02743 Pogona vitticeps Pvit_02743 I 0.758
Tal_R001648 Tyto alba Tal_R001648 I 0.758
Brh_R009448 Buceros rhinoceros Brh_R009448 I 0.758
ENSSHAG00000015005 Sarcophilus harrisii ENSSHAG00000015005 I 0.758
ENSMEUG00000015091 Macropus eugenii ENSMEUG00000015091 I 0.758
SP4 Myotis lucifugus ENSMLUG00000013137 I 0.758
ENSLOCG00000011495 Lepisosteus oculatus ENSLOCG00000011495 I 0.758
ENSLOCG00000007856 Lepisosteus oculatus ENSLOCG00000007856 I 0.758
SP4 Loxodonta africana ENSLAFG00000022398 I 0.758
SP4 Monodelphis domestica ENSMODG00000001368 I 0.758
ENSMPUG00000013911 Mustela putorius furo ENSMPUG00000013911 I 0.758
ENSONIG00000008768 Oreochromis niloticus ENSONIG00000008768 I 0.758
SP4 Oryctolagus cuniculus ENSOCUG00000015345 I 0.758
ENSOANG00000029507 Ornithorhynchus anatinus ENSOANG00000029507 I 0.758
Sp4 Mus musculus ENSMUSG00000025323 D 0.758
ENSLACG00000001435 Latimeria chalumnae ENSLACG00000001435 I 0.758
ENSGMOG00000002497 Gadus morhua ENSGMOG00000002497 I 0.758
SP4 Canis familiaris ENSCAFG00000002671 I 0.758
ENSAPLG00000010528 Anas platyrhynchos ENSAPLG00000010528 I 0.758
ENSAMXG00000024690 Astyanax mexicanus ENSAMXG00000024690 I 0.758
SP5 Anolis carolinensis ENSACAG00000016843 I 0.758
sp5a Danio rerio ENSDARG00000076571 I 0.758
SP4 Echinops telfairi ENSETEG00000018442 I 0.758
sp4 Gasterosteus aculeatus ENSGACG00000006481 I 0.758
sp5a Gasterosteus aculeatus ENSGACG00000005058 I 0.758
ENSFCAG00000028758 Felis catus ENSFCAG00000028758 I 0.758
ENSFALG00000009748 Ficedula albicollis ENSFALG00000009748 I 0.758
GM23502 Drosophila sechellia FBgn0178369 I 0.758
ENSONIG00000010872 Oreochromis niloticus ENSONIG00000010872 I 0.758
ENSTSYG00000005373 Tarsius syrichta ENSTSYG00000005373 I 0.758
sp5a Takifugu rubripes ENSTRUG00000017816 I 0.758
sp4 Takifugu rubripes ENSTRUG00000008217 I 0.758
sp5a Tetraodon nigroviridis ENSTNIG00000016928 I 0.758
ENSXMAG00000000588 Xiphophorus maculatus ENSXMAG00000000588 I 0.758
ENSXMAG00000004924 Xiphophorus maculatus ENSXMAG00000004924 I 0.758
GD18309 Drosophila simulans FBgn0085065 I 0.758
GG12363 Drosophila erecta FBgn0084750 I 0.758
GE10816 Drosophila yakuba FBgn0084743 I 0.758
Spps Drosophila melanogaster FBgn0039169 D 0.758
sp4 Oryzias latipes ENSORLG00000003968 I 0.758
sp4 Tetraodon nigroviridis ENSTNIG00000002904 I 0.758
ENSTGUG00000014104 Taeniopygia guttata ENSTGUG00000014104 I 0.758
SP4 Pteropus vampyrus ENSPVAG00000015251 I 0.758
ENSPSIG00000009131 Pelodiscus sinensis ENSPSIG00000009131 I 0.758
ENSPFOG00000011175 Poecilia formosa ENSPFOG00000011175 I 0.758
sp5a Oryzias latipes ENSORLG00000017252 I 0.758
sp1 Oryzias latipes ENSORLG00000005195 I 0.758
ENSTGUG00000002680 Taeniopygia guttata ENSTGUG00000002680 I 0.758
SP4 Sorex araneus ENSSARG00000014308 I 0.758
Sp4 Rattus norvegicus ENSRNOG00000005472 I 0.758
ENSPFOG00000001626 Poecilia formosa ENSPFOG00000001626 I 0.758
ENSFALG00000001963 Ficedula albicollis ENSFALG00000001963 I 0.757
Alligator_sinensis_CCG010641.1 Alligator sinensis Alligator_sinensis_CCG010641.1 I 0.757
SP3 Microcebus murinus ENSMICG00000014796 I 0.756