ZNF449 (Vicugna pacos)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSVPAG00000002342 T113469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF449
M04560_2.00 		Homo sapiens
NTGYTKGCWCGCGAB
VTCGCGWGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1 		0.823 0.975
ZNF449
M04561_2.00 		Homo sapiens
RCGCCCAACC
GGTTGGGCGY		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2 		0.823 0.975
ZNF449
M08344_2.00 		Homo sapiens
NNVAGCCCARCCHNNNNNNNN
NNNNNNNNDGGYTGGGCTBNN		 ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE 		0.823 0.975
ZNF449
M08922_2.00 		Homo sapiens
VAGCCCARCCN
NGGYTGGGCTB		 Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C 		0.823 0.975
ZNF449
M04562_2.00 		Homo sapiens
MMGCCCMACC
GGTKGGGCKK		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1 		0.823 0.975
ZNF449
M04563_2.00 		Homo sapiens
NTGYTKGCDCGCGWB
VWCGCGHGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2 		0.823 0.975
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000002165 C2H2 ZF 323 345
ENSVPAP00000002165 C2H2 ZF 351 373
ENSVPAP00000002165 C2H2 ZF 379 401
ENSVPAP00000002165 C2H2 ZF 407 429
ENSVPAP00000002165 C2H2 ZF 435 457
ENSVPAP00000002165 C2H2 ZF 463 485
ENSVPAP00000002165 C2H2 ZF 491 513

Links

Other C2H2 ZF family TFs
Other Vicugna pacos TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF449 Tursiops truncatus ENSTTRG00000010555 I 0.826
ZNF449 Equus caballus ENSECAG00000003581 I 0.826
ZNF449 Oryctolagus cuniculus ENSOCUG00000014649 I 0.826
ZNF449 Pteropus vampyrus ENSPVAG00000006757 I 0.826
ENSBTAP00000024080-D1 Bos grunniens ENSBTAP00000024080-D1 I 0.826
ENSCPOG00000004042 Cavia porcellus ENSCPOG00000004042 I 0.826
ZNF449 Bos taurus ENSBTAG00000018090 I 0.826
Myotis_brandtii_ZNF449_10001399 Myotis brandtii Myotis_brandtii_ZNF449_10001399 I 0.826
ENSOARG00000011892 Ovis aries ENSOARG00000011892 I 0.826
ZNF449 Sus scrofa ENSSSCG00000012691 I 0.826
ENSEEUG00000003860 Erinaceus europaeus ENSEEUG00000003860 I 0.824
ENSNLEG00000002174 Nomascus leucogenys ENSNLEG00000002174 I 0.824
ENSETEG00000009064 Echinops telfairi ENSETEG00000009064 I 0.824
ENSPANG00000012789 Papio anubis ENSPANG00000012789 I 0.823
ENSP00000339585 Macaca fascicularis ENSP00000339585 I 0.823
ENSPPYG00000020749 Pongo abelii ENSPPYG00000020749 I 0.823
ZNF449 Pan troglodytes ENSPTRG00000022299 I 0.823
ENSSTOG00000024213 Ictidomys tridecemlineatus ENSSTOG00000024213 I 0.823
ENSMPUG00000012654 Mustela putorius furo ENSMPUG00000012654 I 0.823
ENSFCAG00000024967 Felis catus ENSFCAG00000024967 I 0.823
ENSCSAG00000007689 Chlorocebus sabaeus ENSCSAG00000007689 I 0.823
ZNF449 Callithrix jacchus ENSCJAG00000014517 I 0.823
ZNF449 Canis familiaris ENSCAFG00000018905 I 0.823
ZNF449 Homo sapiens ENSG00000173275 D 0.823
ZNF449 Gorilla gorilla ENSGGOG00000000032 I 0.823
ZNF449 Macaca mulatta ENSMMUG00000008108 I 0.823
ENSAMEG00000011267 Ailuropoda melanoleuca ENSAMEG00000011267 I 0.823
Zfp449 Dipodomys ordii ENSDORG00000003522 I 0.817
Zfp449 Mus musculus ENSMUSG00000073176 I 0.817
ZNF449 Otolemur garnettii ENSOGAG00000003684 I 0.817
Zfp449 Rattus norvegicus ENSRNOG00000050562 I 0.816
ZNF449 Microcebus murinus ENSMICG00000003164 I 0.813
ENSLAFG00000017131 Loxodonta africana ENSLAFG00000017131 I 0.812